Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RHM60_RS14530 Genome accession   NZ_CP133785
Coordinates   3291227..3291634 (-) Length   135 a.a.
NCBI ID   WP_003234584.1    Uniprot ID   A0AAP2WFC8
Organism   Pseudomonas sp. MH9.3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3286227..3296634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RHM60_RS14515 (RHM60_14515) - 3288231..3290282 (-) 2052 WP_322212111.1 methyl-accepting chemotaxis protein -
  RHM60_RS14520 (RHM60_14520) - 3290279..3290803 (-) 525 WP_209985911.1 chemotaxis protein CheW -
  RHM60_RS14525 (RHM60_14525) pilH 3290816..3291181 (-) 366 WP_003234583.1 twitching motility response regulator PilH -
  RHM60_RS14530 (RHM60_14530) pilG 3291227..3291634 (-) 408 WP_003234584.1 twitching motility response regulator PilG Regulator
  RHM60_RS14535 (RHM60_14535) gshB 3291872..3292825 (+) 954 WP_057006529.1 glutathione synthase -
  RHM60_RS14540 (RHM60_14540) - 3292902..3293807 (+) 906 WP_209985913.1 energy transducer TonB -
  RHM60_RS14545 (RHM60_14545) - 3293875..3294444 (+) 570 WP_231422799.1 YqgE/AlgH family protein -
  RHM60_RS14550 (RHM60_14550) ruvX 3294444..3294881 (+) 438 WP_003234589.1 Holliday junction resolvase RuvX -
  RHM60_RS14555 (RHM60_14555) pyrR 3294955..3295461 (+) 507 WP_209985916.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RHM60_RS14560 (RHM60_14560) - 3295486..3296490 (+) 1005 WP_209985919.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14830.37 Da        Isoelectric Point: 7.3533

>NTDB_id=876805 RHM60_RS14530 WP_003234584.1 3291227..3291634(-) (pilG) [Pseudomonas sp. MH9.3]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKACVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=876805 RHM60_RS14530 WP_003234584.1 3291227..3291634(-) (pilG) [Pseudomonas sp. MH9.3]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAAACCCTGTT
GAAGAACGTGGGCTGCGACGTGATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGGATTGTCGATCATCACCCGCACA
TTATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
GCGATCCCGGTGATCATGCTGTCGTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGGGTCGATCAGTT
TTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTGCGTGCCCGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.311

90.37

0.644
  vicR Streptococcus mutans UA159

38.889

93.333

0.363