Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RHM55_RS13330 Genome accession   NZ_CP133784
Coordinates   2835753..2836163 (-) Length   136 a.a.
NCBI ID   WP_219063982.1    Uniprot ID   -
Organism   Pseudomonas sp. MH9.2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2830753..2841163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RHM55_RS13315 (RHM55_13315) - 2832674..2834704 (-) 2031 WP_322176861.1 methyl-accepting chemotaxis protein -
  RHM55_RS13320 (RHM55_13320) - 2834784..2835323 (-) 540 WP_322176862.1 chemotaxis protein CheW -
  RHM55_RS13325 (RHM55_13325) pilH 2835336..2835701 (-) 366 WP_322176863.1 twitching motility response regulator PilH -
  RHM55_RS13330 (RHM55_13330) pilG 2835753..2836163 (-) 411 WP_219063982.1 twitching motility response regulator PilG Regulator
  RHM55_RS13335 (RHM55_13335) gshB 2836424..2837377 (+) 954 WP_322176864.1 glutathione synthase -
  RHM55_RS13340 (RHM55_13340) - 2837509..2838411 (+) 903 WP_407074604.1 energy transducer TonB -
  RHM55_RS13345 (RHM55_13345) - 2838476..2839045 (+) 570 WP_322176865.1 YqgE/AlgH family protein -
  RHM55_RS13350 (RHM55_13350) ruvX 2839045..2839482 (+) 438 WP_219063978.1 Holliday junction resolvase RuvX -
  RHM55_RS13355 (RHM55_13355) pyrR 2839577..2840092 (+) 516 WP_322176866.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RHM55_RS13360 (RHM55_13360) - 2840115..2841119 (+) 1005 WP_219063976.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15147.64 Da        Isoelectric Point: 7.8867

>NTDB_id=876781 RHM55_RS13330 WP_219063982.1 2835753..2836163(-) (pilG) [Pseudomonas sp. MH9.2]
MEQHSTALKVMIIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIKAHVPEFVAVEQQVS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=876781 RHM55_RS13330 WP_219063982.1 2835753..2836163(-) (pilG) [Pseudomonas sp. MH9.2]
ATGGAACAGCATTCCACAGCTTTGAAAGTGATGATCATCGACGATTCGAAGACGATTCGCCGCACCGCAGAGACGTTATT
GAAGAACGTCGGTTGCGAAGTCATCACCGCGATAGACGGGTTCGATGCGCTGGCGAAGATCGCCGACAATCACCCGCGAA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGTGCACTGATCAAGAATAACCGGGCATTCAAG
TCAACGCCGGTGATCATGCTGTCCTCCAGGGATGGCCTGTTCGACAAGGCCAAGGGCCGGATAGTCGGCTCAGACCAGTT
TCTGACCAAGCCTTTCAGCAAGGAAGAACTACTGAACGCGATCAAGGCCCATGTGCCGGAGTTCGTTGCAGTAGAACAAC
AAGTATCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

91.912

0.684
  vicR Streptococcus mutans UA159

39.062

94.118

0.368