Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RHM59_RS15555 Genome accession   NZ_CP133783
Coordinates   3511929..3512339 (-) Length   136 a.a.
NCBI ID   WP_322167063.1    Uniprot ID   -
Organism   Pseudomonas sp. MH10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3506929..3517339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RHM59_RS15540 (RHM59_15540) - 3508846..3510888 (-) 2043 WP_322224644.1 methyl-accepting chemotaxis protein -
  RHM59_RS15545 (RHM59_15545) - 3510962..3511501 (-) 540 WP_322167064.1 chemotaxis protein CheW -
  RHM59_RS15550 (RHM59_15550) pilH 3511512..3511877 (-) 366 WP_299829060.1 twitching motility response regulator PilH -
  RHM59_RS15555 (RHM59_15555) pilG 3511929..3512339 (-) 411 WP_322167063.1 twitching motility response regulator PilG Regulator
  RHM59_RS15560 (RHM59_15560) gshB 3512590..3513543 (+) 954 WP_322224646.1 glutathione synthase -
  RHM59_RS15565 (RHM59_15565) - 3513725..3514624 (+) 900 WP_322167061.1 energy transducer TonB -
  RHM59_RS15570 (RHM59_15570) - 3514681..3515250 (+) 570 WP_322167060.1 YqgE/AlgH family protein -
  RHM59_RS15575 (RHM59_15575) ruvX 3515250..3515690 (+) 441 WP_322224648.1 Holliday junction resolvase RuvX -
  RHM59_RS15580 (RHM59_15580) pyrR 3515779..3516291 (+) 513 WP_322167058.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RHM59_RS15585 (RHM59_15585) - 3516314..3517318 (+) 1005 WP_322167057.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15105.60 Da        Isoelectric Point: 7.8859

>NTDB_id=876747 RHM59_RS15555 WP_322167063.1 3511929..3512339(-) (pilG) [Pseudomonas sp. MH10]
MEQHSTALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIKAHVPEFVAVEQQVS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=876747 RHM59_RS15555 WP_322167063.1 3511929..3512339(-) (pilG) [Pseudomonas sp. MH10]
ATGGAACAACATTCCACAGCTTTGAAAGTGATGGTTATCGACGATTCGAAGACGATTCGCCGAACCGCTGAGACGCTGTT
GAAAAACGTCGGTTGCGAAGTCATCACTGCAATCGACGGGTTTGATGCACTAGCGAAGATCGCGGATAACCACCCCAGAA
TTATTTTCGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCGTTGATCAAGAATAATCGTGCGTTCAAG
TCGACGCCGGTGATTATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGCCGGATCGTCGGTTCCGACCAGTT
TCTGACCAAGCCTTTTAGCAAGGAAGAACTGCTGAATGCGATCAAGGCCCATGTGCCTGAATTCGTTGCAGTAGAACAAC
AAGTATCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

91.912

0.699
  vicR Streptococcus mutans UA159

39.062

94.118

0.368