Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   TOL5_RS18100 Genome accession   NZ_AP024708
Coordinates   3909814..3914307 (-) Length   1497 a.a.
NCBI ID   WP_151781311.1    Uniprot ID   -
Organism   Acinetobacter sp. Tol 5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3904814..3919307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TOL5_RS18080 (TOL5_35710) - 3904835..3905332 (-) 498 WP_119386286.1 hypothetical protein -
  TOL5_RS18085 (TOL5_35720) fimA 3905386..3905922 (-) 537 WP_009585666.1 type 1 fimbrial major subunit FimA -
  TOL5_RS18090 (TOL5_35730) - 3906320..3908383 (-) 2064 WP_042086134.1 EAL domain-containing protein -
  TOL5_RS18095 (TOL5_35740) - 3909338..3909805 (-) 468 WP_009586246.1 hypothetical protein -
  TOL5_RS18100 (TOL5_35750) chpA 3909814..3914307 (-) 4494 WP_151781311.1 Hpt domain-containing protein Regulator
  TOL5_RS18105 (TOL5_35760) - 3914452..3916521 (-) 2070 WP_004827618.1 methyl-accepting chemotaxis protein -
  TOL5_RS18110 (TOL5_35770) - 3916564..3917100 (-) 537 WP_004827616.1 chemotaxis protein CheW -
  TOL5_RS18115 (TOL5_35780) - 3917104..3917472 (-) 369 WP_004827615.1 response regulator -
  TOL5_RS18120 (TOL5_35790) pilG 3917493..3917876 (-) 384 WP_004827613.1 twitching motility response regulator PilG Regulator
  TOL5_RS18125 (TOL5_35800) - 3918161..3918802 (+) 642 WP_171496514.1 hypothetical protein -

Sequence


Protein


Download         Length: 1497 a.a.        Molecular weight: 169267.17 Da        Isoelectric Point: 4.4388

>NTDB_id=87597 TOL5_RS18100 WP_151781311.1 3909814..3914307(-) (chpA) [Acinetobacter sp. Tol 5]
MKEILKHLVEHVTLPEDAYLDQDDEILEIFVEELEEIFEQLQASLDQWLNDESKDKELVNVRRYFHTLKGSGRMVGAKRS
GELAWTVEDTLNRVIAKNLELSTEIQQYVSAVFNVYKFKLYAEFLNKQPHHLDLAPLVYLGQQLQQKQSLEPALADLLSL
AHTLNHENVLTGLEIADSEPLVEHIETVAAMANHENAEEHAVADLIQIDESAVETTPTSDESLISETLTIFVEESEEHLA
TIKDFLHLEQHTPEQYNRLIRALHTLRGSSSMAHIQDVFEASGKVEHLFKVLVQEDTESSKNENALLTYYAEFVSDYLHV
LKQTGDQDTQLAQIYQKFNDAWERYDFQHQYQQDHQSQAGLVTQLVDLEIDLLLDAEFEFDKRAQVEYPEYFQQLIQQAQ
ILVDHTDNRASQGIHDFSLALKDGYTQIIAKPDLLNTDYAFEIFSKAHQEFIHLFDTLASGQRVSLSGATQAILDELHDY
VHQEIDVDQIQIAEPSIEPAVQHAVVAVSDINAVETGNHYVLTQINLDKQNIDSAQSQREFDADVLDIFIEEADELLVGM
DHDLNTWSSHPDDTTALNNLMRYLHTLKGGANMVQATHIGLIAHELETIYERVIKGQLKAGPQVIQSIRLIQDDVADRIQ
LIREKSIDYPATHILEVLQHIDQQQFLHDTNVEIAEKAQDEIVLVDESVTPEFDVISADQQQATLEQAEPFVEQIQVHDL
DDAERVAQETFIEEARELIDDGLNILNQWFDQRSNRSLLLQLQRIAHSLKGGAKMVKLEGVADIAYELENAFEQFGQHNF
NSNVYDGLLESAFHWLDAAIFKQSYDNFDGLKLNLNRMQYVDVSAQLPEKLSRTNLIFEQTNNEFVQGDGTEPPSMLGEW
DLSEKTETNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLTDMELAIQRLADQLRRMEGELESQIIAKHGDL
SARYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQ
RLVRQTASTVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDTEQRQKAGKPLTGRIDLNISRQGTDVLVS
FKDDGKGIDPAIIRDKAIEKGLIKSDQHLEPEEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSLGGQVSVSSELG
HGSTFTIRVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPAALEEYFETQNDYFDIDYQSYKLRYLGEFTANQVTPR
LHGFAHSLPVLLIKGSLGQSVAILVDQLIGSRSQIVVKPIGKQFAAINAIAGATILGDGQVCLILDGQNIARQVQGSSRG
GAEYLQQDKQRHRDQRRLIMIVDDSVTVRKVTSRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTN
LVRHHEIHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLANIDALLTVK

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=87597 TOL5_RS18100 WP_151781311.1 3909814..3914307(-) (chpA) [Acinetobacter sp. Tol 5]
ATGAAAGAAATATTAAAACATTTAGTTGAACACGTCACTTTACCTGAAGATGCTTATCTTGATCAGGATGATGAGATTTT
AGAAATTTTTGTAGAAGAACTTGAAGAAATTTTTGAACAGTTGCAAGCTTCTCTTGATCAATGGCTAAATGATGAGTCCA
AAGATAAGGAATTGGTGAATGTACGTCGCTATTTCCATACCCTTAAAGGCTCTGGACGTATGGTGGGGGCAAAGCGTTCA
GGTGAGTTGGCTTGGACTGTTGAAGATACATTAAATCGTGTAATTGCAAAAAACTTGGAATTAAGTACTGAAATTCAACA
ATATGTCAGTGCTGTATTTAATGTGTATAAGTTCAAATTGTATGCTGAGTTTTTAAATAAACAACCACATCATTTAGATT
TGGCACCATTGGTGTATTTGGGGCAACAATTACAGCAGAAACAGAGTTTAGAACCTGCTTTGGCGGATCTACTGTCACTT
GCGCATACCCTCAATCATGAGAATGTGCTGACGGGTTTAGAAATTGCTGATAGCGAGCCACTTGTAGAGCATATAGAAAC
AGTAGCAGCTATGGCAAACCACGAAAATGCCGAAGAGCATGCAGTGGCAGACCTGATTCAAATTGATGAATCTGCTGTGG
AAACAACGCCGACTTCGGATGAAAGTTTAATCTCTGAAACCCTGACGATTTTTGTTGAAGAGTCGGAAGAACATCTGGCA
ACGATCAAAGACTTTTTGCATTTAGAGCAACATACACCGGAACAATATAATCGCTTGATTCGGGCATTACATACTTTGCG
CGGAAGTTCTTCTATGGCGCATATTCAGGATGTATTTGAAGCAAGTGGTAAAGTTGAGCATTTGTTTAAAGTGTTGGTCC
AAGAAGATACGGAGTCTTCTAAAAATGAAAACGCCCTATTGACTTATTATGCTGAATTCGTCAGTGATTATTTGCATGTA
CTCAAGCAAACCGGTGATCAAGATACGCAATTAGCCCAGATTTATCAAAAATTTAATGATGCTTGGGAGCGTTATGATTT
CCAACATCAATATCAACAAGATCATCAGTCACAAGCAGGTTTAGTGACTCAATTGGTCGATTTGGAAATTGATCTATTGT
TGGATGCTGAATTCGAGTTTGATAAACGCGCTCAAGTTGAATATCCAGAATATTTCCAACAACTGATTCAACAGGCTCAG
ATCCTCGTCGATCATACCGACAATCGTGCGTCACAAGGTATTCATGATTTCAGTCTTGCACTCAAAGACGGATATACACA
GATTATTGCCAAGCCTGATTTGTTGAATACGGATTATGCTTTCGAAATATTCTCTAAAGCACATCAAGAATTCATTCATT
TATTTGATACCTTGGCATCTGGTCAGCGTGTCAGCTTGAGTGGTGCAACTCAGGCGATTTTGGATGAGCTTCATGATTAT
GTACATCAAGAAATTGATGTAGACCAGATTCAAATTGCTGAACCAAGCATTGAGCCAGCAGTTCAACATGCGGTAGTAGC
TGTATCTGATATTAACGCTGTTGAGACAGGTAATCATTATGTCTTAACTCAAATTAATCTCGATAAGCAAAATATAGATT
CTGCGCAAAGTCAGCGTGAGTTTGATGCTGACGTTCTTGATATTTTTATTGAGGAGGCAGATGAGCTGTTGGTAGGTATG
GATCATGACCTAAATACATGGTCAAGTCATCCAGATGATACCACTGCACTCAATAATTTAATGCGCTATTTGCACACTTT
AAAAGGTGGCGCAAATATGGTTCAGGCGACGCATATTGGTTTAATTGCTCATGAACTCGAAACAATTTATGAGCGCGTGA
TTAAAGGTCAGCTCAAAGCTGGACCACAAGTTATTCAATCTATTCGTTTGATTCAAGATGATGTCGCAGATCGTATTCAG
TTGATTCGTGAAAAATCTATTGATTATCCTGCAACACACATTCTTGAGGTTTTACAGCATATTGATCAACAGCAATTCTT
GCATGATACGAATGTTGAGATAGCTGAAAAAGCCCAAGATGAGATTGTTTTAGTTGACGAGTCTGTTACTCCAGAATTTG
ATGTTATTTCTGCAGATCAGCAGCAAGCAACGCTTGAACAAGCTGAGCCATTCGTTGAACAGATTCAAGTACATGACTTG
GATGACGCCGAACGTGTTGCTCAAGAAACCTTCATTGAGGAAGCTCGTGAGCTGATTGATGATGGGTTAAATATCTTGAA
TCAATGGTTTGATCAACGAAGTAACCGTAGTTTACTACTTCAATTGCAACGTATTGCACACAGCTTAAAAGGCGGTGCAA
AAATGGTGAAATTGGAAGGTGTTGCGGATATTGCTTATGAGCTTGAAAATGCATTTGAACAATTTGGTCAGCACAACTTT
AATTCCAATGTCTATGACGGTTTATTGGAAAGTGCTTTTCACTGGTTAGATGCAGCAATTTTCAAACAGAGTTACGATAA
TTTTGATGGTTTGAAGTTAAATTTAAACCGTATGCAATATGTCGATGTTTCTGCTCAGCTTCCAGAAAAATTATCTCGAA
CCAATTTGATTTTTGAACAGACCAATAATGAGTTTGTTCAAGGAGATGGAACTGAACCACCATCTATGTTGGGTGAATGG
GATCTTTCTGAAAAAACTGAAACCAATAATGAGATGATTCGTATCTCTGCGGATTTGGTTGAGAAGATGATCGATCTTTC
TGGTGAAAATGCCATCAACCGTTCGCGTATTGAAATGGATTTGGGTCAATTGGGAAATACATTGACCGATATGGAGCTTG
CGATTCAACGTTTGGCAGATCAGCTTCGTCGAATGGAAGGCGAGTTGGAAAGTCAAATTATTGCTAAACATGGGGATTTA
AGTGCGCGCTATGCGGACTTTGACCCATTGGAAATGGACCAATATTCATCCTTGAATCAATTGTCTAAATCGCTTGCTGA
ATCTGCATCCGACTTGGTGGACTTTAAAACCACCTTAGCAGAGAAAATTCGTGATACTGAAGGCTTATTATTGCAACAGT
CACGTATTCAAGCTGAAATTCAAGAAAGCCTGATGCGTACCCGACTTGTTCCTTTCTCTCGTTTATTACCACGATTACAG
CGTTTGGTACGCCAAACAGCCTCGACGGTCAATAAGCCTACCGAACTGTTGGTGAATAATACGGAAGGTGAATTAGATCG
TAATATTTTGGAGAAATTAGTATCTCCATTAGAGCATATGTTGCGTAATGCCATCGACCACGGGATCGAAGATACAGAGC
AGCGACAAAAAGCTGGCAAGCCATTGACTGGTCGAATCGACTTGAATATTAGTCGCCAAGGTACCGATGTTTTGGTGTCC
TTTAAAGATGATGGTAAAGGAATCGATCCTGCAATTATCCGTGATAAAGCCATTGAAAAAGGCTTGATTAAATCAGATCA
GCATTTAGAACCAGAAGAAATTTTACAATTTATTTTCCATCCTGGTTTTAGCACAGCACAACAAGTCACCCAGATTTCTG
GACGCGGTGTTGGACTGGATGTGGTTCAAAGTGAAATTAAATCGTTAGGTGGACAGGTCAGTGTAAGTTCTGAACTGGGG
CATGGCTCTACTTTTACCATCCGTGTGCCAACAACAGTTGCTGTGAGTGATGCATTGATGGTGAAAGTCGGTGATCAACA
GTTTGCTGTGCCATTATCGCAAATTGATCGTATTGTGCGAATTTCCCCAGCCGCTCTGGAAGAGTATTTCGAAACTCAAA
ATGACTATTTCGATATAGATTACCAAAGTTATAAATTGCGTTATCTTGGTGAGTTTACAGCCAATCAGGTGACGCCACGT
TTACATGGCTTTGCACATTCATTACCTGTGTTATTGATTAAAGGGAGCTTAGGTCAATCTGTCGCGATTCTGGTTGATCA
GTTAATTGGTTCGCGTTCTCAAATTGTGGTAAAACCGATTGGGAAGCAATTTGCGGCAATTAATGCGATTGCAGGTGCAA
CGATTCTCGGTGATGGTCAAGTTTGTTTGATTCTTGATGGGCAAAATATTGCGCGACAAGTTCAGGGTTCAAGTCGTGGT
GGTGCAGAATATTTACAACAAGATAAACAACGTCATCGCGATCAACGTCGTCTGATTATGATTGTGGATGACTCGGTGAC
AGTGCGTAAAGTAACGTCACGTTTATTGGAACGTCAAGGTTTTGATGTGATTACGGCTAAAGACGGTGTTGATGCGATTG
AGCAACTTGAAAATGTCAAACCAGATCTGATGTTGCTCGATATTGAAATGCCACGAATGGATGGATTTGAGGTGACCAAT
TTGGTTCGCCATCATGAAATTCATCGTGACTTGCCAATTATTATGATTACCTCACGAACAGGTGAAAAACATCGCGAACG
TGCATTCAGCTTGGGTGTGACAAACTATATGGGTAAACCATTCCAAGAGGCTGATTTATTAGCCAATATTGATGCTTTGT
TGACGGTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.398

100

0.606


Multiple sequence alignment