Detailed information NTG0875583

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: RFN60_RS12695
• Genome accession: NZ_CP133653
• Coordinates: 2477528..2479858 (-)
• Length: 776 a.a.
• NCBI ID: WP_015251673.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain CP38
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2472528..2484858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFN60_RS12660 (RFN60_12660)	yqxA	2472867..2473205 (-)	339	WP_014477382.1	YqxA family protein	-
RFN60_RS12665 (RFN60_12665)	spoIIP	2473222..2474427 (-)	1206	WP_014477383.1	spore autolysin SpoIIP	-
RFN60_RS12670 (RFN60_12670)	gpr	2474490..2475596 (-)	1107	WP_014480309.1	GPR endopeptidase	-
RFN60_RS12675 (RFN60_12675)	rpsT	2475800..2476066 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
RFN60_RS12680 (RFN60_12680)	holA	2476081..2477124 (-)	1044	WP_015251674.1	DNA polymerase III subunit delta	-
RFN60_RS12685 (RFN60_12685)	-	2477164..2477313 (-)	150	WP_003229985.1	hypothetical protein	-
RFN60_RS12690 (RFN60_12690)	yqzM	2477354..2477488 (+)	135	WP_003229983.1	YqzM family protein	-
RFN60_RS12695 (RFN60_12695)	comEC	2477528..2479858 (-)	2331	WP_015251673.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RFN60_RS12700 (RFN60_12700)	comEB	2479862..2480431 (-)	570	WP_003229978.1	ComE operon protein 2	-
RFN60_RS12705 (RFN60_12705)	comEA	2480498..2481118 (-)	621	WP_024572262.1	competence protein ComEA	Machinery gene
RFN60_RS12710 (RFN60_12710)	comER	2481202..2482023 (+)	822	WP_024572261.1	late competence protein ComER	-
RFN60_RS12715 (RFN60_12715)	yqeM	2482089..2482832 (-)	744	WP_029946669.1	class I SAM-dependent methyltransferase	-
RFN60_RS12720 (RFN60_12720)	rsfS	2482829..2483185 (-)	357	WP_014480315.1	ribosome silencing factor	-
RFN60_RS12725 (RFN60_12725)	yqeK	2483203..2483763 (-)	561	WP_048655098.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
RFN60_RS12730 (RFN60_12730)	nadD	2483753..2484322 (-)	570	WP_048655097.1	nicotinate-nucleotide adenylyltransferase	-
RFN60_RS12735 (RFN60_12735)	yhbY	2484334..2484624 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86771.30 Da
• Isoelectric Point: 6.8839

>NTDB_id=875583 RFN60_RS12695 WP_015251673.1 2477528..2479858(-) (comEC) [Bacillus subtilis strain CP38]
MRNSRLLLPMAAASATVGITAAAYFPAIFLFILLLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMSMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPKHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPFYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKMLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVERGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGVLSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=875583 RFN60_RS12695 WP_015251673.1 2477528..2479858(-) (comEC) [Bacillus subtilis strain CP38]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGTTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCCTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACTTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAATTGA
CTGGTACATTAGAAGAACCGAAACACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTCAAGTACAAGGTGCTCAGTTTGAGAAA
ACATATCATATCATTCACAAACAGCCTTCTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGATGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGACTCCATGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATCCGCCTTGGTATAACTAGAGAGAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGTTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGTCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGCCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCAGCA
GGTTAAAACCTCCTTGGGGCAGTTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGCGGC
ATTTGCTGCACGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGTATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGATGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGGAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGATGGAGACGGGCGTTCTGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACTGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGTGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.809	100	0.978