Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   WID27_RS21815 Genome accession   NZ_CP149796
Coordinates   5014278..5015402 (-) Length   374 a.a.
NCBI ID   WP_028416141.1    Uniprot ID   A0ABY2P794
Organism   Streptomyces sp. F41     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5009278..5020402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WID27_RS21790 (WID27_21790) cseB 5009514..5010227 (-) 714 WP_018489324.1 two-component system response regulator CseB -
  WID27_RS21795 (WID27_21795) - 5010246..5010896 (-) 651 WP_070204510.1 hypothetical protein -
  WID27_RS21800 (WID27_21800) - 5011076..5011843 (-) 768 WP_339152857.1 SigE family RNA polymerase sigma factor -
  WID27_RS21805 (WID27_21805) - 5012035..5012964 (-) 930 WP_217688500.1 A/G-specific adenine glycosylase -
  WID27_RS21810 (WID27_21810) - 5013231..5014085 (+) 855 WP_208623862.1 hypothetical protein -
  WID27_RS21815 (WID27_21815) disA 5014278..5015402 (-) 1125 WP_028416141.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  WID27_RS21820 (WID27_21820) radA/sms 5015484..5016905 (-) 1422 WP_070204513.1 DNA repair protein RadA Machinery gene
  WID27_RS21825 (WID27_21825) - 5017120..5019141 (+) 2022 WP_339152858.1 hypothetical protein -
  WID27_RS21830 (WID27_21830) - 5019300..5020142 (-) 843 WP_070203426.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40306.25 Da        Isoelectric Point: 4.9406

>NTDB_id=875258 WID27_RS21815 WP_028416141.1 5014278..5015402(-) (disA) [Streptomyces sp. F41]
MAANDRAAAPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=875258 WID27_RS21815 WP_028416141.1 5014278..5015402(-) (disA) [Streptomyces sp. F41]
GTGGCAGCCAACGACCGGGCGGCAGCGCCCGGAAAGTCCGGCCAAGGCACCGGCAACGAAGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGCATGGACAAGACCGTCGAGTCGATGTGTACCGGCGGGTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGGGTGCAGCTGGTCCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTCTCCCGGGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTGGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGCCGGCTCCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTGGTGGTCCGGGACTATGTGCCCGAGCCGACGGCGAAACGGTCGCGCACGGTGGCGGA
GGCGCTGACGGAGCTGGACTCGCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGGTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTCTCGCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCCAGCGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTCTCGCGGCTGGCGGAGTCGTCGATCCTGGAACGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436