Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   RE735_RS08935 Genome accession   NZ_CP133585
Coordinates   1654969..1655772 (+) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus aerius strain NEB1378     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1649969..1660772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE735_RS08920 (RE735_08920) ahrC 1650992..1651441 (+) 450 WP_309175351.1 transcriptional regulator AhrC/ArgR -
  RE735_RS08925 (RE735_08925) recN 1651476..1653209 (+) 1734 WP_309175352.1 DNA repair protein RecN Machinery gene
  RE735_RS08930 (RE735_08930) spoIVB 1653408..1654685 (+) 1278 WP_309175353.1 SpoIVB peptidase -
  RE735_RS08935 (RE735_08935) spo0A 1654969..1655772 (+) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  RE735_RS08940 (RE735_08940) - 1656222..1657322 (+) 1101 WP_309175354.1 Rap family tetratricopeptide repeat protein -
  RE735_RS08945 (RE735_08945) - 1657548..1658285 (+) 738 WP_309175355.1 glycerophosphodiester phosphodiesterase -
  RE735_RS08950 (RE735_08950) - 1658319..1658555 (-) 237 WP_309175356.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=875112 RE735_RS08935 WP_008342226.1 1654969..1655772(+) (spo0A) [Bacillus aerius strain NEB1378]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=875112 RE735_RS08935 WP_008342226.1 1654969..1655772(+) (spo0A) [Bacillus aerius strain NEB1378]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGTGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTAGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGTGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGACAT
TGAACTGCTTGGGAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACGGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAACATTGATTCCATTTCCTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884