Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RDV59_RS02325 Genome accession   NZ_CP133476
Coordinates   437442..438704 (+) Length   420 a.a.
NCBI ID   WP_021143498.1    Uniprot ID   -
Organism   Streptococcus salivarius strain LMG 11489     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 432442..443704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV59_RS02300 (RDV59_02300) - 432827..434404 (+) 1578 WP_038675212.1 ABC transporter ATP-binding protein -
  RDV59_RS02305 (RDV59_02305) - 434560..435276 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  RDV59_RS02310 (RDV59_02310) - 435402..435740 (+) 339 WP_038675213.1 preprotein translocase subunit YajC -
  RDV59_RS02315 (RDV59_02315) - 435869..436618 (+) 750 WP_002886457.1 isoprenyl transferase -
  RDV59_RS02320 (RDV59_02320) - 436631..437425 (+) 795 WP_037610707.1 phosphatidate cytidylyltransferase -
  RDV59_RS02325 (RDV59_02325) eeP 437442..438704 (+) 1263 WP_021143498.1 RIP metalloprotease RseP Regulator
  RDV59_RS02330 (RDV59_02330) - 438775..440637 (+) 1863 WP_126405083.1 proline--tRNA ligase -
  RDV59_RS02335 (RDV59_02335) - 441119..443059 (+) 1941 WP_038675218.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45836.21 Da        Isoelectric Point: 5.8010

>NTDB_id=874649 RDV59_RS02325 WP_021143498.1 437442..438704(+) (eeP) [Streptococcus salivarius strain LMG 11489]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDISTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETISVKPQENQGSYFLGVSPALKTSLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=874649 RDV59_RS02325 WP_021143498.1 437442..438704(+) (eeP) [Streptococcus salivarius strain LMG 11489]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGCTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACATACAGGTAAGGATGGTACCG
TTTATACTATCCGTATCCTCCCTTTGGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTCACTGCCTATGATTTGGAAGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGTGGTGTTCAAGATATATCGACCAACCGTATCCAGGTAGCCGATGGAGGCGCTGCTC
AGGTGGCAGGATTGAAAAATGGTGATGCCATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AACAATCTCTGTTAAACCTCAGGAGAACCAAGGTAGCTATTTTTTGGGTGTTTCTCCTGCTTTAAAAACAAGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAGGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTCACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(205-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95.238

100

0.952

  eeP Streptococcus thermophilus LMG 18311

95

100

0.95