Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RDV58_RS02850 Genome accession   NZ_CP133475
Coordinates   558128..559387 (+) Length   419 a.a.
NCBI ID   WP_002279919.1    Uniprot ID   -
Organism   Streptococcus mutans strain LMG 14558     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 553128..564387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDV58_RS02820 (RDV58_02820) - 553765..554481 (+) 717 WP_002267147.1 MerR family transcriptional regulator -
  RDV58_RS02825 (RDV58_02825) - 554628..555344 (+) 717 WP_002263515.1 YebC/PmpR family DNA-binding transcriptional regulator -
  RDV58_RS02830 (RDV58_02830) - 555537..555884 (+) 348 WP_002263516.1 thioredoxin domain-containing protein -
  RDV58_RS02835 (RDV58_02835) yajC 556059..556442 (+) 384 WP_002263806.1 preprotein translocase subunit YajC -
  RDV58_RS02840 (RDV58_02840) - 556554..557303 (+) 750 WP_002263518.1 isoprenyl transferase -
  RDV58_RS02845 (RDV58_02845) - 557318..558112 (+) 795 WP_002263519.1 phosphatidate cytidylyltransferase -
  RDV58_RS02850 (RDV58_02850) eeP 558128..559387 (+) 1260 WP_002279919.1 RIP metalloprotease Regulator
  RDV58_RS02855 (RDV58_02855) - 559414..561264 (+) 1851 WP_002273415.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45766.78 Da        Isoelectric Point: 10.1080

>NTDB_id=874587 RDV58_RS02850 WP_002279919.1 558128..559387(+) (eeP) [Streptococcus mutans strain LMG 14558]
MSGLIAFIIIFGIIVLVHEFGHFYFARKSGILVREFAIGMGPKVFAHQGKDGTAYTIRILPLGGYVRMAGWGEDTSEIKT
GIPAALTLNKAGVVTRIDLSDRQVDKTALPINVTAYDLEDKLEITGRVLEETKTYPVDHDATIVEEDGTEIRIAPLDVQY
QKASIWGRLITNFAGPMNNFILGIFVFALLIFVQGGVQDSSSNHVRVTPNSAVAKLGLKNNDQILQIGKNKVHNWNDLTN
AVAKSTSNLKKKEAIPVKAKTQGSVKTLKVIPKKVNGNYVIGVMPSMKTGFGDKIVGAFKMSWDGAFVILNGLKGLILQP
SLNKLGGPVAIYQLSNTAAREGFARVLELMAMLSINLGIFNLLPIPALDGGKILINFIEVIRKKPLKQETETYITLAGVL
IMVALMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=874587 RDV58_RS02850 WP_002279919.1 558128..559387(+) (eeP) [Streptococcus mutans strain LMG 14558]
ATGTCAGGACTAATAGCTTTTATTATTATCTTTGGAATTATAGTTCTTGTCCATGAATTTGGTCATTTCTATTTTGCTAG
AAAATCAGGAATTTTGGTTCGGGAATTTGCCATTGGTATGGGGCCGAAAGTTTTTGCACATCAAGGAAAAGACGGTACAG
CTTATACCATTCGAATTTTGCCTTTAGGTGGCTATGTCCGTATGGCTGGCTGGGGAGAAGATACTAGCGAAATTAAAACA
GGGATACCTGCCGCTTTGACGCTTAATAAAGCAGGTGTGGTCACTCGTATTGACCTTTCTGACAGGCAAGTGGACAAGAC
GGCCTTGCCTATAAATGTGACAGCTTATGATTTAGAAGACAAATTAGAGATTACAGGACGCGTTCTTGAAGAAACTAAGA
CTTATCCAGTGGATCATGATGCAACAATTGTTGAAGAGGATGGAACAGAAATTCGCATTGCACCGCTAGATGTGCAATAT
CAAAAGGCTAGTATTTGGGGACGTTTAATCACTAATTTTGCAGGTCCCATGAATAACTTTATTTTAGGTATTTTTGTTTT
TGCCCTCTTGATTTTTGTGCAAGGCGGTGTTCAGGATTCTTCAAGCAATCATGTGCGTGTGACTCCTAACAGTGCTGTAG
CTAAGCTCGGACTTAAGAATAATGATCAAATTTTACAAATTGGGAAAAACAAAGTTCATAATTGGAATGATCTCACTAAT
GCGGTTGCTAAGTCAACTAGTAATTTGAAAAAGAAAGAAGCTATTCCAGTTAAGGCTAAGACTCAAGGAAGCGTAAAAAC
TTTAAAAGTCATCCCTAAAAAAGTTAATGGGAATTACGTTATTGGTGTCATGCCAAGTATGAAAACAGGATTTGGGGATA
AAATTGTTGGTGCCTTTAAGATGTCTTGGGACGGCGCTTTTGTTATCTTGAATGGTCTTAAAGGGCTAATCCTACAGCCA
AGTCTCAATAAATTAGGTGGTCCTGTTGCGATTTATCAACTGAGTAATACAGCTGCTAGAGAAGGTTTTGCAAGAGTCCT
TGAATTAATGGCTATGCTTTCTATTAATCTGGGTATTTTTAATTTGTTGCCTATTCCTGCTCTTGATGGTGGTAAAATTT
TAATCAATTTTATAGAAGTTATTCGAAAAAAACCGCTCAAACAAGAGACAGAAACCTATATTACCCTCGCTGGTGTTCTT
ATTATGGTTGCGCTTATGATTGCAGTAACTTGGAATGATATCATGCGAGCATTTTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

67.381

100

0.675

  eeP Streptococcus thermophilus LMD-9

67.143

100

0.673