Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | RDV54_RS01835 | Genome accession | NZ_CP133471 |
| Coordinates | 351433..353691 (-) | Length | 752 a.a. |
| NCBI ID | WP_000882498.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain LMG 14557 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 346433..358691
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RDV54_RS01815 (RDV54_01815) | - | 348231..349487 (-) | 1257 | WP_000433508.1 | ISL3 family transposase | - |
| RDV54_RS01820 (RDV54_01820) | - | 349619..350251 (-) | 633 | WP_000502303.1 | GNAT family N-acetyltransferase | - |
| RDV54_RS01825 (RDV54_01825) | - | 350387..350686 (-) | 300 | WP_000767189.1 | DUF1827 family protein | - |
| RDV54_RS01830 (RDV54_01830) | - | 350851..351303 (-) | 453 | WP_000013083.1 | NUDIX hydrolase | - |
| RDV54_RS01835 (RDV54_01835) | clpE | 351433..353691 (-) | 2259 | WP_000882498.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| RDV54_RS01840 (RDV54_01840) | - | 353922..354152 (-) | 231 | WP_049515694.1 | DUF1797 family protein | - |
| RDV54_RS01845 (RDV54_01845) | - | 354343..355026 (+) | 684 | WP_001011639.1 | amino acid ABC transporter permease | - |
| RDV54_RS01850 (RDV54_01850) | - | 355026..355760 (+) | 735 | WP_000140954.1 | amino acid ABC transporter ATP-binding protein | - |
| RDV54_RS01855 (RDV54_01855) | - | 355938..356795 (+) | 858 | WP_000192104.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| RDV54_RS01860 (RDV54_01860) | - | 356933..357754 (+) | 822 | WP_000601058.1 | hypothetical protein | - |
| RDV54_RS01865 (RDV54_01865) | - | 357768..358619 (+) | 852 | WP_001263817.1 | NAD(P)H-hydrate dehydratase | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83742.15 Da Isoelectric Point: 5.2972
>NTDB_id=874466 RDV54_RS01835 WP_000882498.1 351433..353691(-) (clpE) [Streptococcus mitis strain LMG 14557]
MLCQNCKINDSTIHLYTNLNGKQKQIDLCQNCYKIIKTDPNNSLFKGITDLNNRDFDPFGDFFNDLNNFRPSNNTPPTPP
TQSGGGYGGNGGYGSQNRGPAQTPPPSQEKGLLEEFGINVTEIARRGDIDPVIGRDDEIIRVIEILNRRTKNNPVLIGEP
GVGKTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSA
GDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVQYTDAA
IEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQATREEDFEKAAYFRDQIAKYKEM
QKKKVTDQDTPIISEKTIEHIIEQKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLGTPNRPI
GSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDE
VEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRF
DGIIEFKALSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDYIEDAITDYYLENP
SEKDLKAVMTSKGNIQIKSAKKAEVKTSEKEV
MLCQNCKINDSTIHLYTNLNGKQKQIDLCQNCYKIIKTDPNNSLFKGITDLNNRDFDPFGDFFNDLNNFRPSNNTPPTPP
TQSGGGYGGNGGYGSQNRGPAQTPPPSQEKGLLEEFGINVTEIARRGDIDPVIGRDDEIIRVIEILNRRTKNNPVLIGEP
GVGKTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSA
GDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVQYTDAA
IEAAATLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQATREEDFEKAAYFRDQIAKYKEM
QKKKVTDQDTPIISEKTIEHIIEQKTNIPVGDLKEKEQSQLIHLAEDLKSHVIGQDDAVDKIAKAIRRNRVGLGTPNRPI
GSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDE
VEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRF
DGIIEFKALSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDYIEDAITDYYLENP
SEKDLKAVMTSKGNIQIKSAKKAEVKTSEKEV
Nucleotide
Download Length: 2259 bp
>NTDB_id=874466 RDV54_RS01835 WP_000882498.1 351433..353691(-) (clpE) [Streptococcus mitis strain LMG 14557]
ATGCTTTGTCAAAACTGTAAAATCAATGACTCAACGATTCATCTTTATACCAATCTCAATGGAAAGCAAAAACAAATTGA
CCTCTGTCAAAACTGCTATAAGATTATCAAGACAGATCCTAACAATAGCCTCTTTAAAGGTATTACGGATCTGAACAATC
GTGACTTTGATCCCTTTGGTGATTTCTTCAATGACCTAAACAATTTCAGGCCTTCTAACAATACTCCTCCGACTCCCCCA
ACCCAATCAGGTGGAGGTTACGGTGGAAATGGCGGTTATGGTTCCCAAAATCGTGGACCTGCTCAAACTCCTCCACCAAG
CCAAGAAAAAGGCCTACTGGAAGAATTTGGTATCAACGTAACTGAAATTGCCCGTCGTGGAGATATTGACCCCGTTATTG
GGCGCGACGATGAGATTATCCGTGTCATAGAAATTCTCAATCGCAGAACCAAGAATAATCCTGTTCTTATCGGTGAACCA
GGTGTCGGAAAAACTGCCGTTGTCGAAGGTCTAGCTCAGAAAATAGTTGATGGAGATGTTCCCCATAAACTACAAGGAAA
ACAAGTCATCCGTCTGGATGTGGTTAGCTTAGTTCAAGGAACGGGTATCCGTGGACAATTTGAAGAACGCATGCAAAAAC
TCATGGAAGAAATTCGCAAACGTGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTCGGTGCTGGTTCTGCG
GGCGATGGCAATATGGATGCAGGAAATATCCTCAAGCCCGCCCTTGCTCGTGGAGAGCTGCAATTGGTCGGTGCTACTAC
CCTCAATGAATACCGTATCATTGAAAAAGATGCAGCCCTAGAGCGTCGTATGCAACCTGTTAAAGTGGATGAACCAACAG
TGGAGGAAACAATTACTATCCTCAAAGGCATTCAAAAGAAATACGAAGACTACCACCACGTTCAGTATACCGATGCTGCA
ATTGAAGCAGCTGCAACTCTGTCCAATCGCTACATCCAAGATCGCTTCTTGCCTGACAAGGCCATTGACCTCCTAGATGA
AGCTGGTTCTAAGATGAACTTGACCTTGAATTTTGTGGATCCTAAAGTAATCGATCAGCGCTTGATTGAGGCTGAAAATC
TTAAATCTCAAGCTACACGAGAAGAAGATTTTGAGAAGGCCGCCTACTTCCGTGACCAGATTGCCAAGTATAAGGAAATG
CAAAAGAAAAAGGTCACAGACCAAGATACTCCTATCATTAGTGAGAAAACCATTGAGCACATTATCGAGCAGAAAACCAA
TATTCCTGTTGGTGATTTAAAAGAGAAAGAACAATCTCAACTCATCCATCTAGCCGAAGACCTCAAGTCTCATGTTATTG
GACAAGATGATGCTGTCGATAAGATTGCCAAGGCTATTCGCCGTAATCGTGTCGGTCTCGGTACCCCTAACCGCCCAATC
GGAAGTTTCCTTTTCGTTGGGCCAACTGGAGTCGGTAAGACAGAACTTTCCAAACAATTAGCTATCGAACTCTTTGGTTC
TGCTGACAGCATGATTCGCTTTGATATGAGTGAATATATGGAAAAACACAGTGTGGCGAAATTAGTCGGTGCCCCTCCAG
GTTATGTCGGCTATGACGAGGCTGGGCAATTAACTGAAAAAGTCCGCCGCAATCCCTACTCTCTTATTCTCTTGGATGAA
GTAGAGAAAGCCCATCCAGATGTCATGCATATGTTCCTCCAGGTCTTGGACGATGGTCGTTTAACAGATGGACAAGGACG
TACCGTTAGCTTCAAGGACGCCATCATCATCATGACTTCAAATGCAGGTACAGGTAAGGCAGAAGCTAGCGTTGGATTTG
GTGCTGCTAGAGAAGGACGTACCAACTCTGTTCTTGGTGAACTCGGTAACTTCTTTAGCCCAGAGTTTATGAACCGTTTT
GATGGTATTATCGAATTTAAGGCTCTCAGCAAAGATAACCTCCTTCAGATTGTCGAGCTTATGCTTGCAGATGTTAACAA
ACGTCTTTCTAGCAACAACATTCATTTGGATGTAACCGACAAGGTCAAGGAAAAATTGGTTGACCTTGGTTATGATCCAA
AAATGGGAGCACGCCCACTTCGTCGTACTATTCAAGACTATATTGAGGACGCAATCACTGACTACTACCTTGAAAATCCA
AGCGAAAAAGACCTCAAGGCAGTGATGACCAGCAAGGGTAACATTCAAATCAAATCTGCCAAAAAAGCTGAAGTAAAGAC
TTCTGAAAAAGAAGTATAA
ATGCTTTGTCAAAACTGTAAAATCAATGACTCAACGATTCATCTTTATACCAATCTCAATGGAAAGCAAAAACAAATTGA
CCTCTGTCAAAACTGCTATAAGATTATCAAGACAGATCCTAACAATAGCCTCTTTAAAGGTATTACGGATCTGAACAATC
GTGACTTTGATCCCTTTGGTGATTTCTTCAATGACCTAAACAATTTCAGGCCTTCTAACAATACTCCTCCGACTCCCCCA
ACCCAATCAGGTGGAGGTTACGGTGGAAATGGCGGTTATGGTTCCCAAAATCGTGGACCTGCTCAAACTCCTCCACCAAG
CCAAGAAAAAGGCCTACTGGAAGAATTTGGTATCAACGTAACTGAAATTGCCCGTCGTGGAGATATTGACCCCGTTATTG
GGCGCGACGATGAGATTATCCGTGTCATAGAAATTCTCAATCGCAGAACCAAGAATAATCCTGTTCTTATCGGTGAACCA
GGTGTCGGAAAAACTGCCGTTGTCGAAGGTCTAGCTCAGAAAATAGTTGATGGAGATGTTCCCCATAAACTACAAGGAAA
ACAAGTCATCCGTCTGGATGTGGTTAGCTTAGTTCAAGGAACGGGTATCCGTGGACAATTTGAAGAACGCATGCAAAAAC
TCATGGAAGAAATTCGCAAACGTGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTCGGTGCTGGTTCTGCG
GGCGATGGCAATATGGATGCAGGAAATATCCTCAAGCCCGCCCTTGCTCGTGGAGAGCTGCAATTGGTCGGTGCTACTAC
CCTCAATGAATACCGTATCATTGAAAAAGATGCAGCCCTAGAGCGTCGTATGCAACCTGTTAAAGTGGATGAACCAACAG
TGGAGGAAACAATTACTATCCTCAAAGGCATTCAAAAGAAATACGAAGACTACCACCACGTTCAGTATACCGATGCTGCA
ATTGAAGCAGCTGCAACTCTGTCCAATCGCTACATCCAAGATCGCTTCTTGCCTGACAAGGCCATTGACCTCCTAGATGA
AGCTGGTTCTAAGATGAACTTGACCTTGAATTTTGTGGATCCTAAAGTAATCGATCAGCGCTTGATTGAGGCTGAAAATC
TTAAATCTCAAGCTACACGAGAAGAAGATTTTGAGAAGGCCGCCTACTTCCGTGACCAGATTGCCAAGTATAAGGAAATG
CAAAAGAAAAAGGTCACAGACCAAGATACTCCTATCATTAGTGAGAAAACCATTGAGCACATTATCGAGCAGAAAACCAA
TATTCCTGTTGGTGATTTAAAAGAGAAAGAACAATCTCAACTCATCCATCTAGCCGAAGACCTCAAGTCTCATGTTATTG
GACAAGATGATGCTGTCGATAAGATTGCCAAGGCTATTCGCCGTAATCGTGTCGGTCTCGGTACCCCTAACCGCCCAATC
GGAAGTTTCCTTTTCGTTGGGCCAACTGGAGTCGGTAAGACAGAACTTTCCAAACAATTAGCTATCGAACTCTTTGGTTC
TGCTGACAGCATGATTCGCTTTGATATGAGTGAATATATGGAAAAACACAGTGTGGCGAAATTAGTCGGTGCCCCTCCAG
GTTATGTCGGCTATGACGAGGCTGGGCAATTAACTGAAAAAGTCCGCCGCAATCCCTACTCTCTTATTCTCTTGGATGAA
GTAGAGAAAGCCCATCCAGATGTCATGCATATGTTCCTCCAGGTCTTGGACGATGGTCGTTTAACAGATGGACAAGGACG
TACCGTTAGCTTCAAGGACGCCATCATCATCATGACTTCAAATGCAGGTACAGGTAAGGCAGAAGCTAGCGTTGGATTTG
GTGCTGCTAGAGAAGGACGTACCAACTCTGTTCTTGGTGAACTCGGTAACTTCTTTAGCCCAGAGTTTATGAACCGTTTT
GATGGTATTATCGAATTTAAGGCTCTCAGCAAAGATAACCTCCTTCAGATTGTCGAGCTTATGCTTGCAGATGTTAACAA
ACGTCTTTCTAGCAACAACATTCATTTGGATGTAACCGACAAGGTCAAGGAAAAATTGGTTGACCTTGGTTATGATCCAA
AAATGGGAGCACGCCCACTTCGTCGTACTATTCAAGACTATATTGAGGACGCAATCACTGACTACTACCTTGAAAATCCA
AGCGAAAAAGACCTCAAGGCAGTGATGACCAGCAAGGGTAACATTCAAATCAAATCTGCCAAAAAAGCTGAAGTAAAGAC
TTCTGAAAAAGAAGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
98.402 |
99.867 |
0.983 |
| clpE | Streptococcus pneumoniae D39 |
98.402 |
99.867 |
0.983 |
| clpE | Streptococcus pneumoniae R6 |
98.402 |
99.867 |
0.983 |
| clpE | Streptococcus pneumoniae TIGR4 |
98.269 |
99.867 |
0.981 |
| clpE | Streptococcus mutans UA159 |
83.333 |
99.734 |
0.831 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.494 |
100 |
0.762 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.714 |
89.229 |
0.461 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.847 |
83.378 |
0.399 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.91 |
83.91 |
0.394 |
| clpC | Streptococcus pneumoniae Rx1 |
46.91 |
83.91 |
0.394 |
| clpC | Streptococcus pneumoniae D39 |
46.91 |
83.91 |
0.394 |
| clpC | Streptococcus mutans UA159 |
46.89 |
83.378 |
0.391 |
| clpC | Streptococcus thermophilus LMD-9 |
46.795 |
82.979 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.4 |
83.112 |
0.386 |