Detailed information NTG0874430

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RDV53_RS02025
• Genome accession: NZ_CP133470
• Coordinates: 417047..418150 (-)
• Length: 367 a.a.
• NCBI ID: WP_005696822.1
• Uniprot ID: -
• Organism: Haemophilus parainfluenzae ATCC 33392 strain DSM 8978
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 412047..423150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV53_RS02000 (RDV53_02000)	folA	412461..412946 (+)	486	WP_032822614.1	type 3 dihydrofolate reductase	-
RDV53_RS02005 (RDV53_02005)	uhpC	413142..414467 (+)	1326	WP_005696818.1	MFS transporter family glucose-6-phosphate receptor UhpC	-
RDV53_RS02010 (RDV53_02010)	pfkA	414545..415510 (-)	966	WP_005696819.1	6-phosphofructokinase	-
RDV53_RS02015 (RDV53_02015)	-	415621..416214 (-)	594	WP_005696820.1	hypothetical protein	-
RDV53_RS02020 (RDV53_02020)	yaaA	416207..416983 (-)	777	WP_005696821.1	peroxide stress protein YaaA	-
RDV53_RS02025 (RDV53_02025)	dprA	417047..418150 (-)	1104	WP_005696822.1	DNA-processing protein DprA	Machinery gene
RDV53_RS02030 (RDV53_02030)	leuA	418673..420220 (+)	1548	WP_005696823.1	2-isopropylmalate synthase	-
RDV53_RS02035 (RDV53_02035)	leuB	420307..421383 (+)	1077	WP_005696824.1	3-isopropylmalate dehydrogenase	-
RDV53_RS02040 (RDV53_02040)	leuC	421474..422883 (+)	1410	WP_005696825.1	3-isopropylmalate dehydratase large subunit	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40838.99 Da
• Isoelectric Point: 5.8754

>NTDB_id=874430 RDV53_RS02025 WP_005696822.1 417047..418150(-) (dprA) [Haemophilus parainfluenzae ATCC 33392 strain DSM 8978]
MSDFTSILLRLAQVPKLGSVRIQQILAHVNIEDLLNYDEVAFQQMGWDALQIRRWFQPEMKFIEPALSWAEKEGHHLIHC
FSNEYPFLLKQISGFPPLLFVKGNLTALSAQQIAMVGSRYCSAYGEYWAKYFATELSLAGLTVTSGLALGIDGFSHQAVV
DIQGQTIAVLGSGLDHIYPAKHRRLAEQIIENNGALVSEFIPTQAPIAENFPRRNRIISGLSLGSLVIEATEKSGSLITA
RYALEQNRDIFALPGNIQSEYSQGCHKLIKQGAMLVENVKDILDSLNHSVAFHPPLHTPINQPLTAKILTVEPSHPELYQ
HISYTPISLDDLSVALNLPVDLLLVQLLDLELQDLIVNENGLYKRIA

Nucleotide

• Length: 1104 bp

>NTDB_id=874430 RDV53_RS02025 WP_005696822.1 417047..418150(-) (dprA) [Haemophilus parainfluenzae ATCC 33392 strain DSM 8978]
ATGAGCGATTTTACGTCGATTTTGTTGCGATTAGCTCAAGTGCCCAAATTGGGCAGTGTGCGGATTCAACAAATTTTGGC
CCATGTGAATATAGAAGACTTGTTAAATTATGATGAAGTGGCATTTCAACAAATGGGTTGGGATGCTTTGCAGATTCGTC
GTTGGTTTCAGCCGGAAATGAAATTTATTGAGCCCGCTTTGAGTTGGGCAGAAAAAGAAGGCCATCATTTAATCCACTGT
TTTTCAAATGAGTATCCTTTTTTACTCAAACAAATTAGTGGTTTTCCGCCCTTGTTATTTGTGAAAGGCAATTTGACCGC
ACTTTCTGCTCAGCAAATCGCCATGGTTGGAAGCCGTTATTGTTCCGCTTATGGGGAATATTGGGCAAAATATTTTGCGA
CAGAGCTTTCTCTCGCAGGATTGACGGTGACGAGTGGGTTGGCTTTAGGTATTGATGGATTTAGCCATCAGGCGGTGGTG
GATATTCAAGGGCAGACCATTGCCGTATTGGGCAGCGGATTAGATCACATTTACCCCGCTAAACATCGTCGATTAGCCGA
GCAAATTATCGAAAATAACGGGGCATTAGTTTCTGAATTTATCCCTACGCAAGCGCCGATTGCTGAAAATTTTCCTCGTC
GTAATCGCATTATCAGCGGGCTTTCATTAGGATCGTTAGTGATTGAAGCCACAGAGAAAAGTGGTTCACTCATTACAGCA
CGCTATGCCTTAGAACAAAACCGCGACATTTTTGCGTTGCCGGGGAATATTCAAAGTGAATACAGTCAAGGCTGCCATAA
ACTGATTAAGCAAGGGGCGATGTTGGTGGAAAATGTTAAAGATATTTTAGATAGCCTCAATCACAGCGTTGCTTTTCATC
CGCCATTACATACGCCAATCAATCAACCACTTACTGCCAAAATACTTACGGTGGAGCCGAGTCATCCTGAACTTTATCAA
CATATCAGTTATACACCGATAAGTCTTGATGATTTATCGGTTGCATTGAATTTGCCGGTGGATTTGCTTTTAGTACAGTT
ATTAGATTTAGAGTTACAAGACTTAATCGTCAATGAGAATGGACTCTATAAGCGGATAGCGTAA

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (70-277)

• DprA winged helix domain (DprA_WH) (309-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	70.479	100	0.722
dprA	Glaesserella parasuis strain SC1401	56.395	93.733	0.529
dprA	Vibrio campbellii strain DS40M4	45.152	98.365	0.444
dprA	Vibrio cholerae strain A1552	43.49	98.365	0.428
dprA	Legionella pneumophila strain ERS1305867	40.548	99.455	0.403