Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   WJ438_RS18200 Genome accession   NZ_CP149447
Coordinates   3903384..3904508 (+) Length   374 a.a.
NCBI ID   WP_406726192.1    Uniprot ID   -
Organism   Streptomyces sp. GD-15H     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3898384..3909508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WJ438_RS18185 (WJ438_18170) - 3898750..3899598 (+) 849 WP_406726190.1 hypothetical protein -
  WJ438_RS18190 (WJ438_18175) - 3899705..3901512 (-) 1808 Protein_3610 BACON domain-containing protein -
  WJ438_RS18195 (WJ438_18180) radA 3901733..3903142 (+) 1410 WP_406726191.1 DNA repair protein RadA Machinery gene
  WJ438_RS18200 (WJ438_18185) disA 3903384..3904508 (+) 1125 WP_406726192.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  WJ438_RS18205 (WJ438_18190) - 3904582..3905584 (+) 1003 Protein_3613 IS5 family transposase -
  WJ438_RS18210 (WJ438_18195) - 3905677..3906522 (-) 846 WP_406726193.1 hypothetical protein -
  WJ438_RS18215 (WJ438_18200) - 3906856..3907805 (+) 950 Protein_3615 A/G-specific adenine glycosylase -
  WJ438_RS18220 (WJ438_18205) - 3908103..3908642 (+) 540 WP_406726194.1 SigE family RNA polymerase sigma factor -
  WJ438_RS18225 (WJ438_18210) - 3908630..3909298 (+) 669 WP_406726195.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40172.87 Da        Isoelectric Point: 5.3634

>NTDB_id=873985 WJ438_RS18200 WP_406726192.1 3903384..3904508(+) (disA) [Streptomyces sp. GD-15H]
MAANDRAAAPGKSGGSTGADRQMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVETLCSGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDQALHELNALPQAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=873985 WJ438_RS18200 WP_406726192.1 3903384..3904508(+) (disA) [Streptomyces sp. GD-15H]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCACCGGCGCTGATCGCCAGATGCGCGCCTCGTT
GAGTGCCGTGGCACCCGGCACCGCTCTCCGTGACGGCCTGGAGCGCGTACTCCGGGGCAACACCGGTGGCCTCATCGTGC
TCGGTTCCGACAAGACCGTCGAGACGCTGTGCAGTGGCGGTTTCGTACTGGATGTCGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAACTGGACGGCGGCATCGTCCTGTCGTCCGACCTGTCGAAGATCCTTCGGGCCGGCGTCCAGCTGGTGCC
CGACCCGACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGTGTCTCCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTCGACGGCCACCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACGTTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCCGGCACCCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTGCGGGACGTCTCGGCGGTCGCGCAGCGGCTGGAGATGGTACGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACCGACGGCCGTCTCCTCTCCCTCCAGCTCGACGAATTGATCGCG
GGAGTGGAACCGGAGCGCGAGCTGGTCGTGCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACCGTCGACCA
GGCCCTGCACGAGCTGAACGCGCTCCCCCAGGCCGAGCTTCTGGAACTGTCGACGGTGGCCCGCGCCCTGGGTTACACCG
GCTCCCCCGAGACGCTGGACTCGGCGGTGTCCCCGCGCGGCTTCCGGCTGCTGGCCAAGGTGCCGAGGCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTCCGGGAGGGCCTGTCGAGGCTGGCGGAGAGCTCGATCCTGGAGCGTTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.499

95.455

0.444