Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   Q7Q33_RS01690 Genome accession   NZ_CP133412
Coordinates   310185..310325 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain KK001     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 305185..315325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7Q33_RS01665 (Q7Q33_01665) amhX 306014..307165 (-) 1152 WP_003246319.1 M20 peptidase aminoacylase family protein -
  Q7Q33_RS01670 (Q7Q33_01670) ycgA 307315..308748 (+) 1434 WP_009966488.1 YfcC family protein -
  Q7Q33_RS01675 (Q7Q33_01675) ycgB 308864..309445 (+) 582 WP_003246445.1 DUF6773 family protein -
  Q7Q33_RS01680 (Q7Q33_01680) amyE 309594..310115 (+) 522 Protein_286 alpha-amylase -
  Q7Q33_RS01685 (Q7Q33_01685) - 310096..310239 (-) 144 Protein_287 condensation domain-containing protein -
  Q7Q33_RS01690 (Q7Q33_01690) comS 310185..310325 (-) 141 WP_010886404.1 competence protein ComS Regulator
  Q7Q33_RS01695 (Q7Q33_01695) comK 310374..310952 (-) 579 WP_003245329.1 competence transcription factor ComK Regulator
  Q7Q33_RS01700 (Q7Q33_01700) - 311537..312400 (+) 864 WP_025811090.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(D) -
  Q7Q33_RS01705 (Q7Q33_01705) amyE 312472..313513 (+) 1042 Protein_291 alpha-amylase -
  Q7Q33_RS01710 (Q7Q33_01710) lctE 313690..314655 (+) 966 WP_003234685.1 L-lactate dehydrogenase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=873835 Q7Q33_RS01690 WP_010886404.1 310185..310325(-) (comS) [Bacillus subtilis strain KK001]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=873835 Q7Q33_RS01690 WP_010886404.1 310185..310325(-) (comS) [Bacillus subtilis strain KK001]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1