Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RCG25_RS19845 Genome accession   NZ_CP133269
Coordinates   3956970..3957170 (-) Length   66 a.a.
NCBI ID   WP_308080548.1    Uniprot ID   -
Organism   Neobacillus sp. PS2-9     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3951970..3962170
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCG25_RS19825 (RCG25_19825) - 3952010..3952789 (-) 780 WP_308080543.1 DUF2268 domain-containing protein -
  RCG25_RS19830 (RCG25_19830) fabF 3954223..3955461 (-) 1239 WP_308080544.1 beta-ketoacyl-ACP synthase II -
  RCG25_RS19835 (RCG25_19835) - 3955570..3956502 (-) 933 WP_308080545.1 beta-ketoacyl-ACP synthase III -
  RCG25_RS19840 (RCG25_19840) - 3956680..3956937 (+) 258 WP_308080547.1 hypothetical protein -
  RCG25_RS19845 (RCG25_19845) comZ 3956970..3957170 (-) 201 WP_308080548.1 ComZ family protein Regulator
  RCG25_RS19850 (RCG25_19850) med 3957191..3958138 (-) 948 WP_308080549.1 BMP family ABC transporter substrate-binding protein Regulator
  RCG25_RS19855 (RCG25_19855) - 3958285..3959121 (-) 837 WP_308080550.1 hypothetical protein -
  RCG25_RS19860 (RCG25_19860) - 3959201..3959923 (-) 723 WP_308080551.1 hydrolase -
  RCG25_RS19865 (RCG25_19865) - 3960094..3960276 (+) 183 WP_308080552.1 YjzD family protein -

Sequence

Protein


Download         Length: 66 a.a.        Molecular weight: 7667.79 Da        Isoelectric Point: 4.1766

>NTDB_id=873156 RCG25_RS19845 WP_308080548.1 3956970..3957170(-) (comZ) [Neobacillus sp. PS2-9]
MNNQDHTLQFMQIAMKYLPEAKEQLDQAGVELSMELIQPFMNLFTKVMEEAYELGRESALSELKQS

Nucleotide


Download         Length: 201 bp        

>NTDB_id=873156 RCG25_RS19845 WP_308080548.1 3956970..3957170(-) (comZ) [Neobacillus sp. PS2-9]
ATGAACAATCAAGATCACACATTACAATTTATGCAAATCGCGATGAAGTATTTACCAGAGGCAAAGGAACAATTGGATCA
GGCTGGGGTTGAATTATCTATGGAATTAATCCAACCATTTATGAACCTATTTACTAAAGTAATGGAAGAGGCATATGAAT
TAGGAAGAGAAAGTGCCTTAAGTGAATTGAAGCAATCTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(6-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

71.186

89.394

0.636