Detailed information NTG0872888

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: RCG24_RS02090
• Genome accession: NZ_CP133263
• Coordinates: 398194..399249 (-)
• Length: 351 a.a.
• NCBI ID: WP_308079088.1
• Uniprot ID: -
• Organism: Neobacillus sp. OS1-32
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 393194..404249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCG24_RS02045 (RCG24_02045)	-	393686..393925 (-)	240	WP_202652601.1	DUF2626 domain-containing protein	-
RCG24_RS02050 (RCG24_02050)	-	394010..394705 (-)	696	WP_202652736.1	metalloregulator ArsR/SmtB family transcription factor	-
RCG24_RS02055 (RCG24_02055)	-	395011..395199 (-)	189	WP_202652603.1	YqzE family protein	-
RCG24_RS02060 (RCG24_02060)	comGG	395263..395571 (-)	309	WP_308078191.1	competence type IV pilus minor pilin ComGG	-
RCG24_RS02065 (RCG24_02065)	comGF	395643..396116 (-)	474	WP_308078192.1	competence type IV pilus minor pilin ComGF	-
RCG24_RS02070 (RCG24_02070)	-	396067..396405 (-)	339	WP_308078193.1	hypothetical protein	-
RCG24_RS02075 (RCG24_02075)	comGD	396389..396826 (-)	438	WP_308078194.1	competence type IV pilus minor pilin ComGD	-
RCG24_RS02080 (RCG24_02080)	comGC	396828..397157 (-)	330	WP_308078195.1	competence type IV pilus major pilin ComGC	Machinery gene
RCG24_RS02085 (RCG24_02085)	comGB	397176..398213 (-)	1038	WP_308078196.1	competence type IV pilus assembly protein ComGB	-
RCG24_RS02090 (RCG24_02090)	comGA	398194..399249 (-)	1056	WP_308079088.1	competence type IV pilus ATPase ComGA	Machinery gene
RCG24_RS02095 (RCG24_02095)	-	399436..400227 (-)	792	WP_308078197.1	YqhG family protein	-
RCG24_RS02100 (RCG24_02100)	-	400205..401896 (-)	1692	WP_308078198.1	SNF2-related protein	-
RCG24_RS02105 (RCG24_02105)	gcvT	402347..403450 (+)	1104	WP_308078199.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 39266.47 Da
• Isoelectric Point: 9.1081

>NTDB_id=872888 RCG24_RS02090 WP_308079088.1 398194..399249(-) (comGA) [Neobacillus sp. OS1-32]
MLADRIISDAARNQATDIHIIPRKTDTLVQIRLNNKLIPRLSLPKAECNKLISHFKFTANMDIGERRRPQSGAIVCNVNG
QLIGLRLSTLPSNNSESLVIRLLPQQEQIPFHQLSLFPAMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNETAHLF
HRNVITLEDPVEKNYDSVLQVQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVLSTMHTRDAR
GAVFRLHEFGINWLEVEQTLIAITAQRLVELTCPYCEGECSPHCYSSGRWKRASVFELLSGRNLTATMRAAKGEPVKVKY
KTLKEVIKKGIALGYIQESEYERLVYDDEET

Nucleotide

• Length: 1056 bp

>NTDB_id=872888 RCG24_RS02090 WP_308079088.1 398194..399249(-) (comGA) [Neobacillus sp. OS1-32]
ATGTTAGCTGACCGAATCATTTCGGATGCAGCAAGAAACCAGGCGACAGATATTCACATTATTCCTCGCAAGACCGATAC
ACTAGTGCAAATCCGTTTAAACAACAAACTCATTCCCCGATTATCACTGCCAAAAGCTGAATGCAACAAACTCATTTCCC
ACTTTAAATTTACAGCCAATATGGATATCGGTGAACGCAGACGCCCGCAAAGCGGTGCGATTGTTTGCAATGTAAACGGA
CAACTAATCGGCCTGAGATTATCCACACTTCCTTCAAACAACAGCGAAAGCCTCGTGATCCGCCTGTTACCGCAGCAGGA
ACAAATCCCTTTTCACCAGCTCTCACTCTTTCCGGCAATGACGCGCAAATTATTAGCCCTGCTCAAGCATGCCCATGGGT
TAATCATCTTCACCGGGCCAACCGGATCCGGTAAAACGACAACCTTGTACTCGTTATTAAACGAAACTGCACACCTCTTT
CATCGTAATGTCATTACACTCGAAGACCCGGTTGAAAAAAACTATGATTCCGTTCTGCAAGTCCAAGTGAATGAAAAAGC
TGGTGTTACCTATGCAGCCGGCTTAAAAGCAATTCTCCGTCATGACCCGGACATTATTATGGTGGGGGAAATCAGGGATG
CGGAAACAGCAAAAATTGCCGTAAGAGCTGCGTTGACTGGCCATTTGGTACTCAGTACGATGCATACGCGAGATGCAAGA
GGCGCGGTATTCCGCCTCCATGAATTTGGGATCAACTGGCTGGAGGTAGAGCAAACATTAATCGCGATTACGGCTCAAAG
ATTAGTGGAATTGACTTGTCCATATTGTGAAGGCGAGTGTTCACCACATTGTTATTCAAGCGGCAGATGGAAACGCGCAA
GTGTATTTGAACTTTTATCGGGGAGAAATTTAACCGCAACGATGAGAGCAGCGAAGGGGGAACCAGTCAAAGTAAAATAT
AAGACGTTAAAAGAAGTGATCAAGAAAGGCATTGCGCTAGGTTACATTCAAGAATCTGAATATGAGCGGCTGGTGTATGA
TGATGAAGAAACGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (6-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Bacillus subtilis subsp. subtilis str. 168	56.286	99.715	0.561
pilB	Glaesserella parasuis strain SC1401	38.728	98.575	0.382