Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RCG22_RS09465 Genome accession   NZ_CP133262
Coordinates   1962214..1962405 (-) Length   63 a.a.
NCBI ID   WP_066252115.1    Uniprot ID   -
Organism   Neobacillus sp. OS1-33     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1957214..1967405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCG22_RS09445 (RCG22_09445) - 1957686..1958711 (-) 1026 WP_308106633.1 ABC transporter ATP-binding protein -
  RCG22_RS09450 (RCG22_09450) - 1958849..1959649 (-) 801 WP_308106634.1 DUF2268 domain-containing protein -
  RCG22_RS09455 (RCG22_09455) fabF 1959772..1961010 (-) 1239 WP_098260906.1 beta-ketoacyl-ACP synthase II -
  RCG22_RS09460 (RCG22_09460) - 1961094..1962025 (-) 932 Protein_1872 beta-ketoacyl-ACP synthase III -
  RCG22_RS09465 (RCG22_09465) comZ 1962214..1962405 (-) 192 WP_066252115.1 ComZ family protein Regulator
  RCG22_RS09470 (RCG22_09470) med 1962427..1963374 (-) 948 WP_308106635.1 BMP family ABC transporter substrate-binding protein Regulator
  RCG22_RS09475 (RCG22_09475) - 1963543..1964382 (-) 840 WP_308106636.1 hypothetical protein -
  RCG22_RS09480 (RCG22_09480) - 1964462..1965184 (-) 723 WP_308106637.1 hydrolase -
  RCG22_RS09485 (RCG22_09485) - 1965347..1965532 (+) 186 WP_098260900.1 YjzD family protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7299.45 Da        Isoelectric Point: 4.1605

>NTDB_id=872837 RCG22_RS09465 WP_066252115.1 1962214..1962405(-) (comZ) [Neobacillus sp. OS1-33]
MNSQDNTLQFMQIAMKYLPEAKEQLDRAGVDLSMELIEPFMNLFTKVMQEAYELGLAEGRKEI

Nucleotide


Download         Length: 192 bp        

>NTDB_id=872837 RCG22_RS09465 WP_066252115.1 1962214..1962405(-) (comZ) [Neobacillus sp. OS1-33]
ATGAATAGTCAAGATAATACATTACAATTTATGCAGATTGCAATGAAATACTTACCAGAAGCAAAGGAACAATTGGATAG
GGCTGGTGTGGATTTATCAATGGAATTAATCGAGCCCTTTATGAATCTTTTTACAAAGGTCATGCAAGAAGCCTATGAAC
TTGGTCTGGCTGAAGGGCGAAAAGAAATATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(6-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

93.651

0.603