Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   RCF71_RS00850 Genome accession   NZ_CP133244
Coordinates   178235..179125 (+) Length   296 a.a.
NCBI ID   WP_232160146.1    Uniprot ID   -
Organism   Staphylococcus chromogenes strain IM     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 173235..184125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCF71_RS00830 (RCF71_00825) - 175077..175625 (+) 549 WP_037576688.1 DUF4064 domain-containing protein -
  RCF71_RS00835 (RCF71_00830) - 175727..176890 (+) 1164 WP_037576686.1 amidohydrolase -
  RCF71_RS00840 (RCF71_00835) - 176975..177412 (-) 438 WP_255201699.1 VOC family protein -
  RCF71_RS00845 (RCF71_00840) braR 177541..178206 (+) 666 WP_037576682.1 response regulator transcription factor Regulator
  RCF71_RS00850 (RCF71_00845) braS 178235..179125 (+) 891 WP_232160146.1 sensor histidine kinase Regulator
  RCF71_RS00855 (RCF71_00850) - 179215..179964 (+) 750 WP_037576681.1 ABC transporter ATP-binding protein -
  RCF71_RS00860 (RCF71_00855) - 179966..181948 (+) 1983 WP_037576678.1 FtsX-like permease family protein -
  RCF71_RS00865 (RCF71_00860) - 181994..182620 (-) 627 WP_037576676.1 FMN-dependent NADH-azoreductase -
  RCF71_RS00870 (RCF71_00865) spn 182856..183176 (-) 321 WP_037576673.1 SPIN family peroxidase inhibitor -

Sequence

Protein


Download         Length: 296 a.a.        Molecular weight: 34452.80 Da        Isoelectric Point: 7.5785

>NTDB_id=872739 RCF71_RS00850 WP_232160146.1 178235..179125(+) (braS) [Staphylococcus chromogenes strain IM]
MMKSELVIFVLTYLLFLSVFYIFELSKEAYAISCAIGLFVFAIYLVIRWIYFKKEETVKQMNERLRQDLREEKIAHRSYQ
KEIENYFLTWIHQIKTPITASKLLLERNEAGAINQVRQEITEIENYTNLALNYLKLLNHETDMVAEKVSLDVIVKPLIQR
YALHFIEHHTRIHTENLNQSVTTDAQWTRIMIEQLLNNALKYAKGGDIWVTFDNEQNALSVRDNGIGIQKADLPKIFEKG
YSGMNGRLNEKSSGIGLFVVKQISNKLQHPIEVVSEPGRSTTFTIYFPHESNLSKM

Nucleotide


Download         Length: 891 bp        

>NTDB_id=872739 RCF71_RS00850 WP_232160146.1 178235..179125(+) (braS) [Staphylococcus chromogenes strain IM]
ATGATGAAAAGTGAGCTTGTAATATTTGTATTAACGTATTTACTATTTCTCAGTGTTTTTTACATTTTTGAGTTATCTAA
GGAAGCCTATGCCATTTCTTGTGCGATTGGACTATTTGTATTTGCAATCTATTTAGTCATACGATGGATTTATTTTAAGA
AAGAAGAAACAGTTAAACAAATGAATGAGAGGCTAAGACAAGATTTAAGAGAAGAAAAAATCGCGCATCGTTCATATCAA
AAAGAAATTGAAAATTACTTTTTAACGTGGATTCATCAAATCAAAACACCGATAACAGCTTCTAAATTACTACTTGAACG
AAATGAAGCGGGAGCCATTAACCAGGTACGTCAAGAAATTACCGAAATTGAAAATTATACGAATTTAGCGCTCAACTATT
TAAAATTATTAAACCATGAAACAGATATGGTCGCTGAAAAAGTGTCCCTCGATGTGATTGTTAAACCATTAATACAGCGT
TATGCTTTACATTTTATTGAGCATCATACTCGAATACATACTGAAAATTTAAATCAAAGCGTGACGACGGACGCCCAATG
GACACGAATTATGATAGAACAATTGTTAAATAACGCTCTGAAATATGCGAAGGGCGGGGACATTTGGGTGACATTTGATA
ATGAGCAAAATGCGCTTTCAGTGCGTGATAATGGCATCGGTATTCAGAAAGCCGATTTGCCGAAAATATTTGAAAAGGGC
TATTCCGGGATGAATGGACGTTTAAATGAAAAATCGAGCGGCATTGGTTTGTTTGTCGTGAAGCAAATTTCCAACAAGTT
ACAACATCCAATTGAAGTTGTTTCAGAGCCGGGACGTTCTACCACCTTTACAATTTATTTTCCTCACGAATCCAATCTTT
CAAAAATGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(185-290)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

50

96.622

0.483