Detailed information NTG0872657

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: RCF74_RS06490
• Genome accession: NZ_CP133235
• Coordinates: 1331349..1332323 (+)
• Length: 324 a.a.
• NCBI ID: WP_021339253.1
• Uniprot ID: -
• Organism: Staphylococcus equorum strain CCM
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1326349..1337323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCF74_RS06460 (RCF74_06440)	-	1326530..1327069 (+)	540	WP_069801563.1	5-formyltetrahydrofolate cyclo-ligase	-
RCF74_RS06465 (RCF74_06445)	-	1327084..1328541 (+)	1458	WP_069801561.1	rhomboid family protein	-
RCF74_RS06470 (RCF74_06450)	-	1328525..1328725 (+)	201	WP_002512453.1	YqgQ family protein	-
RCF74_RS06475 (RCF74_06455)	-	1329315..1330301 (+)	987	WP_021339255.1	glucokinase	-
RCF74_RS06480 (RCF74_06460)	-	1330301..1330624 (+)	324	WP_021339254.1	MTH1187 family thiamine-binding protein	-
RCF74_RS06485 (RCF74_06465)	-	1330626..1331249 (+)	624	WP_069801557.1	MBL fold metallo-hydrolase	-
RCF74_RS06490 (RCF74_06470)	comGA	1331349..1332323 (+)	975	WP_021339253.1	competence type IV pilus ATPase ComGA	Machinery gene
RCF74_RS06495 (RCF74_06475)	comGB	1332295..1333362 (+)	1068	WP_021339252.1	competence type IV pilus assembly protein ComGB	-
RCF74_RS06500 (RCF74_06480)	comGC	1333387..1333704 (+)	318	WP_031265988.1	competence type IV pilus major pilin ComGC	Machinery gene
RCF74_RS06505 (RCF74_06485)	-	1333733..1334128 (+)	396	WP_256093294.1	competence protein	-
RCF74_RS06510 (RCF74_06490)	comGF	1334115..1334828 (+)	714	WP_021339249.1	competence type IV pilus minor pilin ComGF	-
RCF74_RS06515 (RCF74_06495)	-	1335035..1335508 (+)	474	WP_236593604.1	shikimate kinase	-
RCF74_RS06520 (RCF74_06500)	gcvT	1335687..1336778 (+)	1092	WP_119559860.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37344.44 Da
• Isoelectric Point: 9.0566

>NTDB_id=872657 RCF74_RS06490 WP_021339253.1 1331349..1332323(+) (comGA) [Staphylococcus equorum strain CCM]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIRTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMGITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI

Nucleotide

• Length: 975 bp

>NTDB_id=872657 RCF74_RS06490 WP_021339253.1 1331349..1332323(+) (comGA) [Staphylococcus equorum strain CCM]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCGGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGCGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTATTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGGGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	61.111	100	0.611
comGA	Staphylococcus aureus N315	61.111	100	0.611