Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AABJ61_RS10965 | Genome accession | NZ_AP027550 |
| Coordinates | 2232181..2232621 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360895.1 | Uniprot ID | B7LFX5 |
| Organism | Escherichia coli strain LR-51 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2227181..2237621
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ61_RS10945 (VEE01_20840) | aroP | 2228179..2229552 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| AABJ61_RS10950 (VEE01_20850) | ampE | 2229595..2230449 (-) | 855 | WP_000171999.1 | beta-lactamase regulator AmpE | - |
| AABJ61_RS10955 (VEE01_20860) | ampD | 2230446..2230997 (-) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| AABJ61_RS10960 (VEE01_20870) | nadC | 2231085..2231978 (+) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| AABJ61_RS10965 (VEE01_20880) | pilA | 2232181..2232621 (+) | 441 | WP_000360895.1 | prepilin peptidase-dependent pilin | Machinery gene |
| AABJ61_RS10970 (VEE01_20890) | pilB | 2232631..2234016 (+) | 1386 | WP_001025173.1 | type II secretion system protein GspE | Machinery gene |
| AABJ61_RS10975 (VEE01_20900) | hofC | 2234006..2235208 (+) | 1203 | WP_000157234.1 | protein transport protein HofC | - |
| AABJ61_RS10980 (VEE01_20910) | guaC | 2235243..2236286 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| AABJ61_RS10985 | - | 2236442..2236486 (-) | 45 | WP_120795372.1 | protein YacM | - |
| AABJ61_RS10990 (VEE01_20920) | coaE | 2236511..2237131 (+) | 621 | WP_001269527.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15602.71 Da Isoelectric Point: 4.3927
>NTDB_id=87254 AABJ61_RS10965 WP_000360895.1 2232181..2232621(+) (pilA) [Escherichia coli strain LR-51]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=87254 AABJ61_RS10965 WP_000360895.1 2232181..2232621(+) (pilA) [Escherichia coli strain LR-51]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |