Detailed information NTG0087254

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: K6J86_RS02115
• Genome accession: NZ_AP024627
• Coordinates: 422538..423686 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain BEST3136
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 417538..428686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J86_RS02095 (BsBEST3136_03760)	yclH	417915..418595 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
K6J86_RS02100 (BsBEST3136_03770)	yclI	418611..420071 (-)	1461	WP_003234506.1	ABC transporter permease	-
K6J86_RS02105 (BsBEST3136_03780)	yclJ	420284..420967 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
K6J86_RS02110 (BsBEST3136_03790)	yclK	420954..422375 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
K6J86_RS02115 (BsBEST3136_03800)	rapC	422538..423686 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
K6J86_RS02120 (BsBEST3136_03810)	phrC	423670..423792 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
K6J86_RS02125	yczM	423892..423981 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
K6J86_RS02130	yczN	424063..424176 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
K6J86_RS02135 (BsBEST3136_03820)	thrD	424330..425694 (-)	1365	WP_009966541.1	aspartate kinase	-
K6J86_RS02140 (BsBEST3136_03830)	ceuB	426079..427029 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
K6J86_RS02145 (BsBEST3136_03840)	yclO	427022..427969 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=87254 K6J86_RS02115 WP_003246686.1 422538..423686(+) (rapC) [Bacillus subtilis strain BEST3136]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=87254 K6J86_RS02115 WP_003246686.1 422538..423686(+) (rapC) [Bacillus subtilis strain BEST3136]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571