Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QL104_RS29470 Genome accession   NZ_CP133164
Coordinates   6318972..6319376 (-) Length   134 a.a.
NCBI ID   WP_022641612.1    Uniprot ID   -
Organism   Pseudomonas piscis strain 75     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6313972..6324376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL104_RS29455 (QL104_29455) - 6315803..6317866 (-) 2064 WP_053133969.1 methyl-accepting chemotaxis protein -
  QL104_RS29460 (QL104_29460) - 6317998..6318537 (-) 540 WP_085594472.1 chemotaxis protein CheW -
  QL104_RS29465 (QL104_29465) pilH 6318549..6318914 (-) 366 WP_022641611.1 twitching motility response regulator PilH -
  QL104_RS29470 (QL104_29470) pilG 6318972..6319376 (-) 405 WP_022641612.1 twitching motility response regulator PilG Regulator
  QL104_RS29475 (QL104_29475) gshB 6319669..6320640 (+) 972 WP_282879243.1 glutathione synthase -
  QL104_RS29480 (QL104_29480) - 6320770..6321669 (+) 900 WP_085594470.1 energy transducer TonB -
  QL104_RS29485 (QL104_29485) - 6321751..6322320 (+) 570 WP_085594468.1 YqgE/AlgH family protein -
  QL104_RS29490 (QL104_29490) ruvX 6322320..6322757 (+) 438 WP_022641615.1 Holliday junction resolvase RuvX -
  QL104_RS29495 (QL104_29495) pyrR 6323018..6323524 (+) 507 WP_085594466.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14734.23 Da        Isoelectric Point: 7.2445

>NTDB_id=872235 QL104_RS29470 WP_022641612.1 6318972..6319376(-) (pilG) [Pseudomonas piscis strain 75]
MEQQSNALKVMVIDDSKTIRRTAEMLLKNVGCEVITAVDGFEALAKIVDHHPGIIFVDIMMPRLDGYQTCALVKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIRAHVPDFVALAPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=872235 QL104_RS29470 WP_022641612.1 6318972..6319376(-) (pilG) [Pseudomonas piscis strain 75]
ATGGAACAGCAATCCAACGCCTTGAAGGTGATGGTGATCGACGACTCGAAGACGATTCGCCGCACGGCCGAGATGCTGCT
GAAGAACGTCGGCTGCGAGGTCATCACCGCGGTGGATGGCTTCGAAGCCCTGGCCAAGATCGTCGACCACCACCCCGGGA
TCATCTTCGTCGACATCATGATGCCGCGCCTCGACGGTTATCAGACCTGTGCGCTGGTCAAGAACAACAGCGCGTTCAAG
TCCACTCCCGTGATCATGCTGTCCTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGCCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAACCCTTCAGCAAGGAAGAACTGCTCAGCGCGATCAGGGCCCATGTCCCGGACTTCGTCGCGCTTGCGCCAC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701
  vicR Streptococcus mutans UA159

42.735

87.313

0.373