Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   Q9Q86_RS14820 Genome accession   NZ_CP133162
Coordinates   3051277..3051804 (+) Length   175 a.a.
NCBI ID   WP_004909624.1    Uniprot ID   S7WVB7
Organism   Acinetobacter sp. A22     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3046277..3056804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9Q86_RS14805 pilM 3048838..3049896 (+) 1059 WP_004951546.1 pilus assembly protein PilM Machinery gene
  Q9Q86_RS14810 pilN 3049896..3050540 (+) 645 WP_004909633.1 PilN domain-containing protein Machinery gene
  Q9Q86_RS14815 pilO 3050537..3051277 (+) 741 WP_075696026.1 type 4a pilus biogenesis protein PilO Machinery gene
  Q9Q86_RS14820 pilP 3051277..3051804 (+) 528 WP_004909624.1 pilus assembly protein PilP Machinery gene
  Q9Q86_RS14825 pilQ 3051866..3054004 (+) 2139 WP_171293826.1 type IV pilus secretin PilQ Machinery gene
  Q9Q86_RS14830 aroK 3054024..3054584 (+) 561 WP_112986741.1 shikimate kinase AroK -
  Q9Q86_RS14835 aroB 3054605..3055687 (+) 1083 WP_112986742.1 3-dehydroquinate synthase -
  Q9Q86_RS14840 - 3055704..3056582 (+) 879 WP_112986743.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19460.68 Da        Isoelectric Point: 9.3195

>NTDB_id=872212 Q9Q86_RS14820 WP_004909624.1 3051277..3051804(+) (pilP) [Acinetobacter sp. A22]
MNNYKLLFSFMAGLVLVGCDSKIDAVNQKMAEIRNEPALPIEPAPVFSPVPLFNYSAHQLKSPFMPSSLAAELKIMAGKR
VYPNFNRQPQPLESYALESLNMKGSMRGKTNETIALIQTPDRQIERVQVGNYLGMNQGRVVKISPTQIDLVEIVPDGRDG
YVERPRTLVLIGMAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=872212 Q9Q86_RS14820 WP_004909624.1 3051277..3051804(+) (pilP) [Acinetobacter sp. A22]
ATGAATAATTATAAATTATTGTTTAGTTTTATGGCCGGGCTTGTTTTGGTTGGATGTGATTCAAAAATTGACGCTGTAAA
CCAAAAAATGGCTGAAATTCGGAATGAACCTGCTTTACCTATTGAGCCAGCACCGGTATTTAGCCCTGTACCATTATTTA
ACTATTCAGCACATCAATTGAAAAGTCCATTTATGCCAAGCTCATTGGCAGCTGAGTTGAAAATAATGGCGGGTAAACGT
GTTTATCCAAATTTCAATCGTCAACCACAACCACTGGAAAGTTATGCGTTGGAATCCCTAAATATGAAGGGTAGCATGCG
TGGTAAAACGAATGAAACGATAGCGCTGATTCAGACCCCGGACCGACAAATTGAGCGGGTGCAGGTTGGAAACTACTTAG
GAATGAATCAAGGTCGAGTGGTAAAAATTAGTCCGACTCAGATTGATTTGGTGGAAATTGTACCAGATGGGCGTGATGGT
TATGTGGAGAGACCAAGAACACTCGTTCTAATTGGTATGGCACCATAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S7WVB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

79.532

97.714

0.777
  comL Acinetobacter baylyi ADP1

70.286

100

0.703