Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   RBH91_RS02110 Genome accession   NZ_CP133085
Coordinates   390224..390622 (-) Length   132 a.a.
NCBI ID   WP_076758188.1    Uniprot ID   A0A1R1S3K8
Organism   Bacillus swezeyi strain EA208     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 385224..395622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBH91_RS02085 - 385686..386546 (-) 861 WP_307894623.1 transporter substrate-binding domain-containing protein -
  RBH91_RS02090 - 386757..387308 (+) 552 WP_307893298.1 NAD(P)H-dependent oxidoreductase -
  RBH91_RS02095 - 387305..387853 (+) 549 Protein_378 ABC transporter ATP-binding protein -
  RBH91_RS02100 - 387952..388677 (+) 726 WP_307893299.1 AAA family ATPase -
  RBH91_RS02105 - 388748..390184 (+) 1437 WP_307893300.1 family 1 glycosylhydrolase -
  RBH91_RS02110 nin/comJ 390224..390622 (-) 399 WP_076758188.1 competence protein ComJ Regulator
  RBH91_RS02115 nucA/comI 390643..391089 (-) 447 WP_307893301.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  RBH91_RS02120 - 391397..391567 (+) 171 WP_164470202.1 hypothetical protein -
  RBH91_RS02125 - 391573..392385 (+) 813 WP_307893302.1 protein kinase domain-containing protein -
  RBH91_RS02130 - 392406..393917 (+) 1512 WP_307893303.1 FAD-dependent monooxygenase -
  RBH91_RS02135 - 394307..394684 (-) 378 WP_076758194.1 helix-turn-helix domain-containing protein -
  RBH91_RS02140 - 394824..395342 (+) 519 WP_076758196.1 DJ-1/PfpI family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15037.96 Da        Isoelectric Point: 4.3697

>NTDB_id=871711 RBH91_RS02110 WP_076758188.1 390224..390622(-) (nin/comJ) [Bacillus swezeyi strain EA208]
MRKTWGPQEMTMSYHQFTVYQKGGKPPVMDWTDEDIKRGYTALEDAVSFEAAENTTSLVQVRLNCPEPVESFERQISVSF
EVLEGGIEITSVLSKKLTCDIPQGSYQLTCYTVMPDQVHSQAITYILDFRND

Nucleotide


Download         Length: 399 bp        

>NTDB_id=871711 RBH91_RS02110 WP_076758188.1 390224..390622(-) (nin/comJ) [Bacillus swezeyi strain EA208]
TTGAGGAAAACATGGGGACCCCAGGAAATGACGATGTCATACCATCAGTTTACCGTTTATCAAAAAGGCGGCAAACCGCC
TGTAATGGATTGGACAGACGAAGATATTAAAAGAGGCTATACAGCTCTAGAGGATGCGGTTTCGTTTGAAGCAGCCGAAA
ACACAACATCTTTAGTGCAAGTTCGTTTAAACTGCCCTGAGCCGGTGGAATCCTTTGAAAGGCAAATATCCGTTTCTTTC
GAAGTGCTTGAAGGCGGAATCGAGATTACAAGCGTCCTATCAAAAAAGCTGACGTGCGATATTCCGCAAGGATCCTATCA
GCTGACATGCTATACAGTTATGCCTGATCAAGTTCATTCGCAAGCCATCACCTACATTCTCGACTTTAGGAATGACTGA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1R1S3K8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

53.125

96.97

0.515