Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | RBH91_RS00595 | Genome accession | NZ_CP133085 |
| Coordinates | 107864..110293 (+) | Length | 809 a.a. |
| NCBI ID | WP_076762611.1 | Uniprot ID | A0A1R1QXV5 |
| Organism | Bacillus swezeyi strain EA208 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 102864..115293
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RBH91_RS00580 | - | 105740..106204 (+) | 465 | WP_076762614.1 | CtsR family transcriptional regulator | - |
| RBH91_RS00585 | - | 106219..106776 (+) | 558 | WP_076762613.1 | UvrB/UvrC motif-containing protein | - |
| RBH91_RS00590 | - | 106776..107867 (+) | 1092 | WP_307893090.1 | protein arginine kinase | - |
| RBH91_RS00595 | clpC | 107864..110293 (+) | 2430 | WP_076762611.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| RBH91_RS00600 | radA | 110371..111750 (+) | 1380 | WP_076762610.1 | DNA repair protein RadA | Machinery gene |
| RBH91_RS00605 | disA | 111754..112830 (+) | 1077 | WP_076762609.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| RBH91_RS00610 | - | 112958..114046 (+) | 1089 | WP_307893092.1 | PIN/TRAM domain-containing protein | - |
| RBH91_RS00615 | ispD | 114062..114757 (+) | 696 | WP_076762607.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| RBH91_RS00620 | ispF | 114750..115226 (+) | 477 | WP_076762606.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 90147.73 Da Isoelectric Point: 5.8931
>NTDB_id=871708 RBH91_RS00595 WP_076762611.1 107864..110293(+) (clpC) [Bacillus swezeyi strain EA208]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGTSGANSNANTP
TLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMT
LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYR
KYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSK
VRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVEDIAMVVS
SWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES
IFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTD
SKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQTYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKD
IVSLMSEQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEQLLKGQIDKGQNIVLDVDNGEF
VVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGTSGANSNANTP
TLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMT
LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYR
KYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSK
VRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVEDIAMVVS
SWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES
IFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTD
SKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQTYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLKD
IVSLMSEQLTKRLKEQDLSIELTEAAKEKIAEEGVDLEYGARPLRRAIQKHVEDRLSEQLLKGQIDKGQNIVLDVDNGEF
VVKTEAKTN
Nucleotide
Download Length: 2430 bp
>NTDB_id=871708 RBH91_RS00595 WP_076762611.1 107864..110293(+) (clpC) [Bacillus swezeyi strain EA208]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAGGCTCTGCGTCTGGGTCATAA
TAATATTGGAACTGAACATATTCTCCTCGGCCTTGTTCGTGAGGGAGAAGGCATTGCGGCGAAGGCATTGCAGGCGTTGG
GACTCAGCCCTGACAAAATTCAAAAAGAGGTTGAAAGTCTAATTGGCCGCGGCCAGGAAATGTCCCAATCCATTCATTAC
ACACCAAGAGCCAAAAAAGTAACTGAGCTTGCGATGGATGAAGCAAGAAAGCTGGGGCATTCATATGTGGGAACCGAACA
CATCCTCCTGGGCTTAATTCGCGAAGGAGAAGGTGTAGCGGCAAGAGTGCTGAATAACTTAGGCGTCAGCTTAAATAAAG
CGAGACAGCAAGTATTGCAGCTTTTGGGCAGCAATGAGAGCGGCGGAACTTCAGGCGCAAACAGCAACGCTAATACACCT
ACATTAGACAGTCTTGCTCGCGATTTAACGGCCATTGCCAAAGAAGACAGCCTCGATCCCGTCATCGGACGAAGCAAAGA
GATCCAGCGCGTCATTGAAGTATTGAGCAGGAGAACGAAAAACAACCCTGTTTTAATCGGAGAGCCCGGTGTCGGTAAAA
CAGCGATAGCCGAAGGTTTGGCCCAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGCGACAAGCGTGTCATGACG
CTTGATATGGGAACAGTTGTCGCAGGCACAAAATACCGCGGGGAGTTTGAAGACCGCCTTAAAAAAGTGATGGATGAAAT
CCGTCAGGCCGGAAATATCATCCTGTTTATCGATGAACTGCATACTTTAATCGGAGCCGGCGGAGCAGAAGGCGCTATCG
ATGCATCCAATATCCTGAAACCGTCACTGGCACGGGGCGAGCTGCAATGCATCGGTGCTACAACCCTTGATGAATACCGT
AAATACATCGAAAAAGATGCTGCCCTTGAACGGCGTTTTCAGCCGATTCAAGTCGATCAGCCGTCACCTGAAGAAAGCAT
TCAAATTTTAAGAGGGCTCAGAGACCGCTATGAAGCTCACCACCGCGTATCGATTACAGATGAAGCGATCGAGGCGGCTG
TAAAGCTGTCAGACCGCTATATTTCAGACCGTTTCCTGCCTGACAAAGCGATCGATCTAATCGATGAGGCCGGTTCAAAA
GTTCGCCTGCGTTCATTCACAACACCTCCTAATTTAAAAGAGCTTGAACAAAAATTGGATGAGGTGCGTAAAGAAAAAGA
TGCCGCTGTCCAAAGCCAGGAATTTGAAAAAGCAGCATCTTTACGTGATACAGAACAGCGTCTGCGGGAACAGGTGGAAG
AAACAAAGAAAACATGGAAAGAAAAGCAAGGTCAAGAAAACTCCGAAGTAACGGTTGAGGATATCGCGATGGTCGTATCA
AGCTGGACTGGAGTGCCGGTTTCAAAAATAGCGCAAACTGAGACAGATAAACTGCTGAACATGGAGAGCATTCTCCATTC
ACGGGTAATCGGCCAGGATGAAGCCGTTGTCGCGGTAGCCAAAGCTGTCAGACGTGCGCGTGCCGGATTGAAAGATCCAA
AGCGTCCGATCGGGTCATTTATTTTCCTTGGTCCTACAGGGGTAGGTAAAACAGAGCTTGCCCGCGCGCTTGCCGAATCT
ATTTTTGGCGATGAAGAAGCGATGATTCGCATTGATATGTCAGAGTACATGGAGAAACATTCAACATCAAGACTAGTCGG
TTCACCTCCGGGATATGTCGGCTATGATGAGGGAGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCAGTCGTCT
TGCTCGATGAGATTGAAAAAGCGCACCCTGACGTCTTCAATATTTTGCTTCAAGTGCTTGAAGACGGACGTTTGACTGAT
TCAAAAGGGCGCACAGTAGACTTTAGAAATACGATTCTCATCATGACATCCAATGTAGGAGCCAGCGAGCTGAGAAGAAA
TAAATACGTCGGGTTCAACGTGCAGGATGAAACCCAGACATACAAAGATATGAAAGATAAGGTCATGGGTGAATTAAAAC
GCGCTTTCAGACCAGAATTCATTAACCGGATTGATGAAATCATCGTCTTCCACTCTTTGGAGAAAAAACACTTAAAGGAT
ATCGTCTCGCTCATGTCAGAACAATTGACAAAGCGTCTTAAAGAACAAGATCTTTCAATTGAGCTGACGGAAGCGGCAAA
AGAAAAGATTGCCGAAGAAGGAGTGGACCTTGAGTACGGAGCCCGTCCACTCAGAAGAGCCATCCAAAAACATGTCGAAG
ACCGGCTGTCTGAGCAACTTCTGAAAGGTCAAATCGATAAAGGGCAGAACATTGTTCTCGACGTAGATAATGGAGAATTT
GTCGTAAAAACAGAAGCAAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAGGCTCTGCGTCTGGGTCATAA
TAATATTGGAACTGAACATATTCTCCTCGGCCTTGTTCGTGAGGGAGAAGGCATTGCGGCGAAGGCATTGCAGGCGTTGG
GACTCAGCCCTGACAAAATTCAAAAAGAGGTTGAAAGTCTAATTGGCCGCGGCCAGGAAATGTCCCAATCCATTCATTAC
ACACCAAGAGCCAAAAAAGTAACTGAGCTTGCGATGGATGAAGCAAGAAAGCTGGGGCATTCATATGTGGGAACCGAACA
CATCCTCCTGGGCTTAATTCGCGAAGGAGAAGGTGTAGCGGCAAGAGTGCTGAATAACTTAGGCGTCAGCTTAAATAAAG
CGAGACAGCAAGTATTGCAGCTTTTGGGCAGCAATGAGAGCGGCGGAACTTCAGGCGCAAACAGCAACGCTAATACACCT
ACATTAGACAGTCTTGCTCGCGATTTAACGGCCATTGCCAAAGAAGACAGCCTCGATCCCGTCATCGGACGAAGCAAAGA
GATCCAGCGCGTCATTGAAGTATTGAGCAGGAGAACGAAAAACAACCCTGTTTTAATCGGAGAGCCCGGTGTCGGTAAAA
CAGCGATAGCCGAAGGTTTGGCCCAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGCGACAAGCGTGTCATGACG
CTTGATATGGGAACAGTTGTCGCAGGCACAAAATACCGCGGGGAGTTTGAAGACCGCCTTAAAAAAGTGATGGATGAAAT
CCGTCAGGCCGGAAATATCATCCTGTTTATCGATGAACTGCATACTTTAATCGGAGCCGGCGGAGCAGAAGGCGCTATCG
ATGCATCCAATATCCTGAAACCGTCACTGGCACGGGGCGAGCTGCAATGCATCGGTGCTACAACCCTTGATGAATACCGT
AAATACATCGAAAAAGATGCTGCCCTTGAACGGCGTTTTCAGCCGATTCAAGTCGATCAGCCGTCACCTGAAGAAAGCAT
TCAAATTTTAAGAGGGCTCAGAGACCGCTATGAAGCTCACCACCGCGTATCGATTACAGATGAAGCGATCGAGGCGGCTG
TAAAGCTGTCAGACCGCTATATTTCAGACCGTTTCCTGCCTGACAAAGCGATCGATCTAATCGATGAGGCCGGTTCAAAA
GTTCGCCTGCGTTCATTCACAACACCTCCTAATTTAAAAGAGCTTGAACAAAAATTGGATGAGGTGCGTAAAGAAAAAGA
TGCCGCTGTCCAAAGCCAGGAATTTGAAAAAGCAGCATCTTTACGTGATACAGAACAGCGTCTGCGGGAACAGGTGGAAG
AAACAAAGAAAACATGGAAAGAAAAGCAAGGTCAAGAAAACTCCGAAGTAACGGTTGAGGATATCGCGATGGTCGTATCA
AGCTGGACTGGAGTGCCGGTTTCAAAAATAGCGCAAACTGAGACAGATAAACTGCTGAACATGGAGAGCATTCTCCATTC
ACGGGTAATCGGCCAGGATGAAGCCGTTGTCGCGGTAGCCAAAGCTGTCAGACGTGCGCGTGCCGGATTGAAAGATCCAA
AGCGTCCGATCGGGTCATTTATTTTCCTTGGTCCTACAGGGGTAGGTAAAACAGAGCTTGCCCGCGCGCTTGCCGAATCT
ATTTTTGGCGATGAAGAAGCGATGATTCGCATTGATATGTCAGAGTACATGGAGAAACATTCAACATCAAGACTAGTCGG
TTCACCTCCGGGATATGTCGGCTATGATGAGGGAGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCAGTCGTCT
TGCTCGATGAGATTGAAAAAGCGCACCCTGACGTCTTCAATATTTTGCTTCAAGTGCTTGAAGACGGACGTTTGACTGAT
TCAAAAGGGCGCACAGTAGACTTTAGAAATACGATTCTCATCATGACATCCAATGTAGGAGCCAGCGAGCTGAGAAGAAA
TAAATACGTCGGGTTCAACGTGCAGGATGAAACCCAGACATACAAAGATATGAAAGATAAGGTCATGGGTGAATTAAAAC
GCGCTTTCAGACCAGAATTCATTAACCGGATTGATGAAATCATCGTCTTCCACTCTTTGGAGAAAAAACACTTAAAGGAT
ATCGTCTCGCTCATGTCAGAACAATTGACAAAGCGTCTTAAAGAACAAGATCTTTCAATTGAGCTGACGGAAGCGGCAAA
AGAAAAGATTGCCGAAGAAGGAGTGGACCTTGAGTACGGAGCCCGTCCACTCAGAAGAGCCATCCAAAAACATGTCGAAG
ACCGGCTGTCTGAGCAACTTCTGAAAGGTCAAATCGATAAAGGGCAGAACATTGTTCTCGACGTAGATAATGGAGAATTT
GTCGTAAAAACAGAAGCAAAAACGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.309 |
100 |
0.954 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.752 |
99.629 |
0.496 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.852 |
100 |
0.478 |
| clpC | Streptococcus thermophilus LMD-9 |
46.731 |
100 |
0.477 |
| clpC | Streptococcus mutans UA159 |
43.99 |
100 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.062 |
100 |
0.451 |
| clpC | Streptococcus pneumoniae Rx1 |
45.062 |
100 |
0.451 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.938 |
100 |
0.45 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.222 |
0.428 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.926 |
80.222 |
0.417 |
| clpE | Streptococcus pneumoniae Rx1 |
51.926 |
80.222 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
51.926 |
80.222 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
51.926 |
80.222 |
0.417 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.857 |
77.874 |
0.412 |