Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   RBI12_RS03510 Genome accession   NZ_CP133054
Coordinates   715870..720375 (+) Length   1501 a.a.
NCBI ID   WP_057090005.1    Uniprot ID   A0A9X3TGA3
Organism   Acinetobacter pittii strain A774     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 710870..725375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBI12_RS03485 (RBI12_03490) - 711313..711951 (-) 639 WP_017400247.1 hypothetical protein -
  RBI12_RS03490 (RBI12_03495) pilG 712236..712619 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  RBI12_RS03495 (RBI12_03500) pilH 712642..713004 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  RBI12_RS03500 (RBI12_03505) pilI 713065..713601 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  RBI12_RS03505 (RBI12_03510) pilJ 713644..715722 (+) 2079 WP_017482145.1 methyl-accepting chemotaxis protein -
  RBI12_RS03510 (RBI12_03515) chpA 715870..720375 (+) 4506 WP_057090005.1 hybrid sensor histidine kinase/response regulator Regulator
  RBI12_RS03515 (RBI12_03520) - 720375..720842 (+) 468 WP_057090006.1 hypothetical protein -
  RBI12_RS03520 (RBI12_03525) - 721138..722005 (+) 868 Protein_675 alpha/beta fold hydrolase -
  RBI12_RS03525 (RBI12_03530) dapE 722182..723318 (-) 1137 WP_005064372.1 succinyl-diaminopimelate desuccinylase -
  RBI12_RS03530 (RBI12_03535) - 723445..723588 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  RBI12_RS03535 (RBI12_03540) - 723712..724593 (-) 882 WP_017482142.1 DUF1853 family protein -
  RBI12_RS03540 (RBI12_03545) - 724697..725065 (+) 369 WP_017400240.1 YbaN family protein -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171214.60 Da        Isoelectric Point: 4.4137

>NTDB_id=871544 RBI12_RS03510 WP_057090005.1 715870..720375(+) (chpA) [Acinetobacter pittii strain A774]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETNDLEPESTEVLTISTSEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLFNA
EVEQTANEPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLVASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTESETYVIPELNFEVLQQEAINNTALNLSELTSASEQIAESSNQLVEQTELQVLYADHNHTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINAEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVESVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEFFEFENKRYPLRYLSEFVGSQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRLK
LVNEAIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=871544 RBI12_RS03510 WP_057090005.1 715870..720375(+) (chpA) [Acinetobacter pittii strain A774]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTTGAAGATACGCTTAATCGGGTAATCAACCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACAGGTTTAGAAACAAATGACTTAGAACCAGAATCAACAGAAGTTTTAACTATTTC
GACTTCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGATGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAATTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTAGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAACTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCCCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCTGCGGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGATGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCCTTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACGGCGAATGAACCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCGTCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGGTAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAATCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAACCTCAGTGAGTTAACTTCTGCTTCTGAGCAGATTGCTGAGT
CTAGTAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACAATCATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACGTTTATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCATCTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGTTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTACAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCCAAACACGGTATTGAGAAC
TCGCGTTATACGGAATTTGATCCTTTAGAGATGGATCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACAGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTGTTGCCTCGTCTCCAAAGA
ATTGTGAGGCAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTTTTCGTTAATAATACAGAAGGCGAGTTGGACCGGAC
AATGTTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCGCAAC
GTGAGCAAGCGCAGAAACCAGAAACGGGACGTATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGATGATGGGCAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCATTAATGTCTGGTTTGATTAACGCAGAACAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGCACAGCCGATCAAGTTACTCAGATTTCAGGTC
GTGGTGTAGGACTGGATGTAGTACAAAGTGATATTAAGGCTCTAGGTGGCCATGTGAGCGTAGAGTCTGTGTACGGGCAG
GGAACGGTCTTCACAATACGTGTTCCAACTACAGTAGCGGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCTCTGGCCCAAATTGATCGAATTGTACGAGTTTCGCCTGCATCATTAGAACAATATTTTGGAAGCGCACAAG
AATTCTTTGAATTTGAAAATAAACGCTATCCATTGCGCTATTTATCTGAATTTGTTGGTAGTCAACCAATTCCGCGTTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGCCAAACTGTCGCATTATTAGTTGACCAACT
GATTGGATCACGTGCACAGATTGTAGTCAAACCAATTGGGCAGCAGTTCTCTAGTATCGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGTCAAGTTTGCTTAATTTTAGATGGTCAAAATATTGCTCGCCAAATTCAGTCTACTCGTCGACTTAAG
CTGGTTAATGAAGCGATTTATAGACAACGAGAGTCTGATGAGCGACGTCTCATCATGATTGTGGATGACTCAGTAACTGT
ACGTAAAGTAACCTCACGTTTACTCGAGCGCCAAGGCTATGATGTTGTGACCGCTAAAGATGGTGTGGATGCTATAGAGC
AGCTAGAAAACATTAAGCCAGATCTGATGCTGCTTGATATTGAAATGCCACGCATGGATGGTTTTGAAGTTCTTAATCTT
GTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAAACATCGTGAACGAGC
ATTCTCATTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATTTGAAGGGGGGCTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

80.451

100

0.809