Detailed information NTG0871537

Bioinformatically predicted

Overview

• Name: pilY1
• Type: Machinery gene
• Locus tag: RBI12_RS01865
• Genome accession: NZ_CP133054
• Coordinates: 394302..398156 (+)
• Length: 1284 a.a.
• NCBI ID: WP_017481715.1
• Uniprot ID: A0A9X3QIJ6
• Organism: Acinetobacter pittii strain A774
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 389302..403156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBI12_RS01835 (RBI12_01840)	gmk	389584..390213 (-)	630	WP_005804544.1	guanylate kinase	-
RBI12_RS01840 (RBI12_01845)	ispH	390336..391286 (+)	951	WP_002116992.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
RBI12_RS01845 (RBI12_01850)	fimU	391456..391929 (+)	474	WP_017481718.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
RBI12_RS01850 (RBI12_01855)	pilV	391923..392483 (+)	561	WP_079381023.1	type IV pilus modification protein PilV	Machinery gene
RBI12_RS01855 (RBI12_01860)	pilW	392483..393484 (+)	1002	WP_017481717.1	PilW family protein	Machinery gene
RBI12_RS01860 (RBI12_01865)	pilX	393481..394290 (+)	810	WP_017481716.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
RBI12_RS01865 (RBI12_01870)	pilY1	394302..398156 (+)	3855	WP_017481715.1	PilC/PilY family type IV pilus protein	Machinery gene
RBI12_RS01870 (RBI12_01875)	pilY2	398167..398649 (+)	483	WP_002116770.1	type IV pilin protein	Machinery gene
RBI12_RS01875 (RBI12_01880)	pilE	398646..399071 (+)	426	WP_002117055.1	type IV pilin protein	Machinery gene
RBI12_RS01880 (RBI12_01885)	rpsP	399219..399470 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
RBI12_RS01885 (RBI12_01890)	rimM	399490..400038 (+)	549	WP_002116736.1	ribosome maturation factor RimM	-
RBI12_RS01890 (RBI12_01895)	trmD	400081..400836 (+)	756	WP_002116964.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
RBI12_RS01895 (RBI12_01900)	rplS	401056..401424 (+)	369	WP_002116654.1	50S ribosomal protein L19	-
RBI12_RS01900 (RBI12_01905)	lip	401477..402418 (-)	942	WP_080612940.1	triacylglycerol lipase	-

Sequence

Protein

• Length: 1284 a.a.
• Molecular weight: 137696.25 Da
• Isoelectric Point: 7.7443

>NTDB_id=871537 RBI12_RS01865 WP_017481715.1 394302..398156(+) (pilY1) [Acinetobacter pittii strain A774]
MKLKLKNFKPNNLWYAICSSSVAFTWLMTSSVVQASDLQIYASPTAGKKTIVMMLDTSGSMTNNSYGENRLAMLKNGMNA
FLASNNPVLNDTRVGLGNFSANGDSRSGQVLVAAAPLGDASTLNTVGSQRYKLKQAVANLTAGGSTPSAHAYAEAAAYLM
GTTTYSEANYAIRKDSYIKRVRKSDNRTEYSYCMNYRDSQIDTTNLWQPCRSNSYWSNWSTSNPGVDTATAYDTSSDWTY
SYTYYYTTFNYAVANADSGIPKSKSNDTASNPNIVVDRNASNLNAIYQSPLPAVTNRQSCDGQGIYFLSDGEPNNTTNTR
SATVMSTALGSTLGANFTCSGGLSNTTADSGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSSLSSSDVKNACRLS
SRTQSDRKGDDACSPNQTTNAVAAPGYGNGGFFPTQSAQGVTDSVIAFINNLEKVPLQPLTTGAISVPYDALNPKNLQEY
GYLRALEPNPANTYLTWRGNLKKYHVVLSGGNAGAFEANTGGLVYNASGAFRTGTKDYWNSSNYNDGGNVFLGGSYAKVP
LPIAGQNETRDEDGNIIKYYYAVQTKIRNLFTDVSAVAADGSLTKISTSGTNLLKIPAAPPEGTNPFDSVANTASYVLGK
FNASTGQDILKAFPIGLKLKILNYLGYSTDISATTLPSSLVTLNEPYLSMGGSIHSLPVQLTYNGTLDENGNLTSARAQS
ILYGTMEGGLHIVDASTGVEQMAFVPADILNDPVASKALVVGQSDTTAPAHGMDGAWVSDPAYSITTTGSGSSAVSKVTA
KQMNIYGGMRMGGSSYYGLNVLNPASPKLLFRVGADQTDYSRMGQSWSKPVLANIRYNGVIKRVMIVGGGYDQCYENPNI
TLSNSCFTNGKAKGNAVYIIDAKTGERLWWTSDTGSNIDNSNMKHSIVSRISTLDRDADGLVDHLYFGDLGGQIFRIDLN
NNQTKTNSTYSSFGVRVVRLANLATNDATYDSSNDYTAGNAPRFYEPPTVTIHDYGIRTFITVGIASGDRSTPLDVYPLT
GREGMSPSTALSGRPVNNVYGIIDKDFIKKNLMSLTDSQLETKDITRSTLRKNPQILRSGETRVAQIFFPNTGVGQSGWY
RSLSSMSDGTEKANNNFRIKGGLKAFEEPMAITGTLIVPVYDPQGTGIVAADPCLPRVVGETDQQTYCLPFGACLNSDGS
IDQNKENGSGFKTQTGTNCPVGASECNKNVIGSGIRGVTFVPTEDNPPATNSCGKLKLSGNESGTGEWQCTSHLVPARWY
ERYR

Nucleotide

• Length: 3855 bp

>NTDB_id=871537 RBI12_RS01865 WP_017481715.1 394302..398156(+) (pilY1) [Acinetobacter pittii strain A774]
GTGAAACTAAAATTGAAGAATTTTAAGCCAAATAATTTATGGTATGCCATCTGTTCGAGTTCAGTTGCTTTTACATGGCT
AATGACAAGCTCCGTTGTGCAGGCGAGTGATTTACAAATTTATGCTTCACCTACAGCTGGTAAAAAAACTATTGTGATGA
TGTTGGATACATCAGGAAGTATGACCAACAATAGTTATGGCGAAAACCGTCTGGCCATGCTTAAAAATGGTATGAATGCT
TTTTTAGCAAGTAATAATCCTGTTTTAAATGACACTCGTGTGGGGTTGGGAAATTTCTCTGCAAATGGTGATAGCCGAAG
TGGGCAGGTTTTAGTGGCTGCTGCTCCTTTAGGAGATGCGAGTACGTTAAATACAGTGGGTTCTCAACGTTATAAATTAA
AACAGGCTGTTGCAAATTTAACTGCTGGCGGGTCAACGCCTTCAGCACATGCTTATGCGGAAGCTGCTGCTTATTTGATG
GGTACAACGACCTATTCAGAGGCGAATTATGCTATCCGAAAAGATAGCTATATAAAGCGTGTGCGAAAATCTGATAATAG
AACGGAATACTCATATTGTATGAATTATCGCGATTCACAAATCGATACCACAAATCTATGGCAACCTTGTCGCTCTAATA
GCTATTGGAGTAACTGGTCAACTTCTAATCCGGGTGTGGATACGGCAACTGCTTATGATACTTCGTCGGATTGGACCTAT
TCTTATACTTATTACTACACCACCTTTAATTATGCTGTAGCAAATGCAGATAGTGGTATCCCAAAATCAAAATCAAACGA
TACAGCCAGCAATCCCAATATTGTTGTAGATAGAAATGCCTCTAATTTAAATGCTATTTACCAATCTCCTTTACCTGCGG
TGACCAATCGCCAGAGTTGTGATGGGCAAGGAATCTACTTTTTATCAGATGGGGAGCCGAACAATACAACAAATACGCGT
TCTGCAACTGTCATGTCGACAGCCCTAGGCAGCACTTTGGGAGCAAATTTTACTTGTTCTGGAGGTTTGTCTAACACTAC
AGCAGACTCTGGTTGGGCCTGTATGGGGGAATTTGCAAAAAGATTATTTGATAAAACAAAAAACCCAGCTGGGGTTTCTA
TTCAAACAGCATTTGTCGGTTTTGGTAGTGACTTTTCTAGTTTAAGTTCTTCTGATGTAAAAAATGCCTGTCGTTTAAGT
TCGAGAACCCAATCTGACCGAAAAGGAGATGATGCGTGTTCACCGAATCAGACCACAAATGCGGTCGCTGCACCTGGTTA
TGGGAATGGAGGTTTTTTCCCTACCCAAAGTGCGCAAGGTGTAACAGACAGTGTTATCGCATTTATTAATAACTTAGAAA
AAGTTCCGTTACAACCCTTAACCACTGGCGCTATCTCAGTTCCTTATGATGCACTAAACCCTAAAAATTTACAGGAATAT
GGTTACTTACGGGCTTTAGAGCCAAACCCAGCTAACACCTACTTAACATGGCGTGGAAATTTAAAGAAATATCATGTTGT
TTTATCAGGGGGCAATGCAGGTGCTTTTGAAGCTAACACTGGTGGGTTGGTTTACAATGCAAGTGGGGCTTTTAGAACGG
GTACGAAAGATTATTGGAATAGCTCTAATTATAATGATGGAGGTAACGTCTTTTTAGGTGGTTCATATGCAAAAGTTCCT
TTACCAATTGCTGGACAAAATGAAACACGTGATGAAGATGGAAATATCATAAAATATTATTACGCAGTACAAACTAAAAT
CCGCAACTTATTTACTGATGTTTCCGCTGTTGCGGCAGATGGTAGCTTAACGAAAATATCGACTTCTGGAACTAATTTGC
TAAAAATCCCAGCTGCTCCCCCCGAAGGAACTAATCCTTTTGATAGTGTGGCTAATACAGCAAGTTATGTTTTAGGAAAA
TTTAATGCATCAACTGGACAAGATATTTTAAAAGCTTTCCCGATTGGCTTGAAATTAAAAATATTAAATTATCTAGGTTA
CTCAACTGATATTAGCGCTACGACTTTACCTTCGTCATTAGTTACATTGAATGAACCCTATTTATCGATGGGCGGTAGTA
TTCACTCTTTACCAGTACAGCTTACCTATAATGGAACATTAGATGAAAATGGGAATTTAACATCTGCGCGTGCACAATCT
ATTCTCTATGGAACGATGGAAGGTGGTCTGCATATTGTGGATGCTTCAACTGGTGTAGAACAAATGGCTTTCGTTCCCGC
TGATATATTAAATGATCCAGTTGCATCAAAAGCTTTAGTGGTTGGCCAAAGTGACACTACAGCTCCGGCTCACGGTATGG
ATGGGGCTTGGGTATCTGATCCTGCATATAGTATTACTACAACAGGAAGCGGTAGTTCAGCAGTATCAAAAGTAACTGCA
AAGCAAATGAATATTTATGGTGGCATGCGAATGGGGGGCAGCAGTTATTATGGCTTAAATGTCTTAAATCCTGCTTCACC
TAAGCTCCTCTTTAGAGTAGGAGCAGACCAAACTGATTATAGTCGTATGGGGCAGAGTTGGTCTAAACCTGTACTTGCAA
ATATACGTTATAACGGAGTTATTAAACGCGTTATGATTGTTGGTGGTGGCTACGACCAATGTTATGAAAACCCGAATATT
ACCTTGAGCAATTCTTGCTTTACGAATGGAAAAGCAAAAGGGAATGCTGTTTATATTATTGATGCTAAAACTGGGGAGCG
CTTATGGTGGACTAGTGATACAGGCTCTAATATAGATAACTCTAATATGAAGCACAGTATTGTTAGTCGCATTAGTACCT
TAGATCGAGATGCTGATGGTTTAGTCGACCATTTATATTTTGGCGATTTAGGCGGGCAAATTTTCCGTATCGATCTTAAT
AATAACCAGACAAAAACAAATTCAACTTATAGCAGTTTCGGGGTTCGAGTTGTTCGATTAGCCAATTTGGCAACGAATGA
TGCTACTTATGATAGCTCGAACGACTATACCGCTGGGAATGCGCCGCGTTTTTATGAACCGCCCACAGTGACAATTCACG
ATTATGGAATCCGCACTTTTATTACTGTCGGTATTGCTTCAGGTGACCGTAGTACACCTTTAGATGTTTATCCGCTTACA
GGCCGTGAGGGGATGTCACCAAGTACAGCATTAAGTGGAAGACCTGTAAACAACGTTTATGGAATTATCGATAAAGACTT
TATTAAAAAGAATTTAATGTCTTTAACAGATAGCCAGCTTGAAACAAAAGATATTACTCGATCGACGCTTCGAAAAAATC
CACAAATTTTACGGTCTGGGGAAACACGAGTAGCACAGATTTTCTTTCCAAACACTGGGGTCGGGCAAAGTGGTTGGTAT
CGCTCGCTTTCTAGTATGAGCGATGGTACCGAGAAAGCTAATAATAATTTCCGTATTAAAGGTGGGCTAAAAGCTTTTGA
AGAGCCTATGGCAATTACAGGGACTTTAATTGTGCCTGTTTATGACCCGCAGGGAACAGGTATTGTAGCGGCAGACCCAT
GTTTACCCCGTGTAGTAGGTGAAACGGATCAACAGACTTACTGTTTACCATTTGGTGCCTGTCTTAATTCTGATGGGTCA
ATTGATCAAAATAAAGAGAATGGAAGTGGATTCAAAACACAAACTGGTACTAATTGCCCAGTAGGAGCTTCCGAATGTAA
TAAAAACGTTATTGGCTCCGGTATTCGTGGCGTAACATTTGTACCAACGGAGGATAACCCACCTGCGACTAATAGTTGTG
GGAAATTAAAGCTGTCTGGAAACGAGAGTGGAACGGGCGAGTGGCAATGTACAAGTCACTTAGTTCCTGCGCGCTGGTAT
GAGCGTTATCGCTAA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (710-965)

• von Willebrand factor type A domain (VWA_2) (51-161)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY1	Acinetobacter baumannii D1279779	84.729	100	0.851