Detailed information NTG0871535

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: WHU09_RS14815
• Genome accession: NZ_CP148409
• Coordinates: 2937799..2938824 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Z1323CEC0017
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2932799..2943824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHU09_RS14795 (WHU09_14795)	metJ	2933860..2934177 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
WHU09_RS14800 (WHU09_14800)	yiiX	2934361..2934969 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
WHU09_RS14805 (WHU09_14805)	rpmE	2935030..2935242 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
WHU09_RS14810 (WHU09_14810)	priA	2935445..2937643 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
WHU09_RS14815 (WHU09_14815)	cytR	2937799..2938824 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
WHU09_RS14820 (WHU09_14820)	ftsN	2938916..2939875 (+)	960	WP_000068828.1	cell division protein FtsN	-
WHU09_RS14825 (WHU09_14825)	hslV	2939968..2940498 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
WHU09_RS14830 (WHU09_14830)	hslU	2940508..2941839 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
WHU09_RS14835 (WHU09_14835)	menA	2941906..2942832 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
WHU09_RS14840 (WHU09_14840)	rraA	2942925..2943410 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
WHU09_RS14845 (WHU09_14845)	zapB	2943495..2943740 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=871535 WHU09_RS14815 WP_000644904.1 2937799..2938824(+) (cytR) [Escherichia coli strain Z1323CEC0017]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=871535 WHU09_RS14815 WP_000644904.1 2937799..2938824(+) (cytR) [Escherichia coli strain Z1323CEC0017]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628