Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | RBI12_RS01850 | Genome accession | NZ_CP133054 |
| Coordinates | 391923..392483 (+) | Length | 186 a.a. |
| NCBI ID | WP_079381023.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain A774 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 386923..397483
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RBI12_RS01825 (RBI12_01830) | - | 389042..389194 (-) | 153 | WP_107908592.1 | hypothetical protein | - |
| RBI12_RS01830 (RBI12_01835) | rpoZ | 389233..389511 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| RBI12_RS01835 (RBI12_01840) | gmk | 389584..390213 (-) | 630 | WP_005804544.1 | guanylate kinase | - |
| RBI12_RS01840 (RBI12_01845) | ispH | 390336..391286 (+) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| RBI12_RS01845 (RBI12_01850) | fimU | 391456..391929 (+) | 474 | WP_017481718.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| RBI12_RS01850 (RBI12_01855) | pilV | 391923..392483 (+) | 561 | WP_079381023.1 | type IV pilus modification protein PilV | Machinery gene |
| RBI12_RS01855 (RBI12_01860) | pilW | 392483..393484 (+) | 1002 | WP_017481717.1 | PilW family protein | Machinery gene |
| RBI12_RS01860 (RBI12_01865) | pilX | 393481..394290 (+) | 810 | WP_017481716.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 19881.94 Da Isoelectric Point: 8.2175
>NTDB_id=871534 RBI12_RS01850 WP_079381023.1 391923..392483(+) (pilV) [Acinetobacter pittii strain A774]
MLMQGSKRKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNAACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
MLMQGSKRKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNAACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=871534 RBI12_RS01850 WP_079381023.1 391923..392483(+) (pilV) [Acinetobacter pittii strain A774]
ATGTTAATGCAGGGCTCTAAACGAAAAGCTCAAGTTGGGGTAGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTTCGGGCTATGGATGCTTCCTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAATATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATGCAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATTACAATGACAAATTGCCCAGGGGTTACAAGCA
CAATGGCCCAGCAGAGGCAATGTTTGTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
ATGTTAATGCAGGGCTCTAAACGAAAAGCTCAAGTTGGGGTAGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTTCGGGCTATGGATGCTTCCTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAATATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATGCAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATTACAATGACAAATTGCCCAGGGGTTACAAGCA
CAATGGCCCAGCAGAGGCAATGTTTGTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
83.871 |
100 |
0.839 |