Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RBB89_RS02175 Genome accession   NZ_CP132949
Coordinates   472256..472663 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain IPA34     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 467256..477663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBB89_RS02145 (RBB89_02145) - 467304..468308 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  RBB89_RS02150 (RBB89_02150) pyrR 468332..468844 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RBB89_RS02155 (RBB89_02155) ruvX 468956..469390 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  RBB89_RS02160 (RBB89_02160) - 469390..469959 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  RBB89_RS02165 (RBB89_02165) - 470008..470901 (-) 894 WP_003084580.1 TonB family protein -
  RBB89_RS02170 (RBB89_02170) gshB 471048..472001 (-) 954 WP_003100943.1 glutathione synthase -
  RBB89_RS02175 (RBB89_02175) pilG 472256..472663 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  RBB89_RS02180 (RBB89_02180) pilH 472710..473075 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  RBB89_RS02185 (RBB89_02185) - 473126..473662 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  RBB89_RS02190 (RBB89_02190) pilJ 473747..475795 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  RBB89_RS02195 (RBB89_02195) pilK 475856..476731 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=870804 RBB89_RS02175 WP_003084583.1 472256..472663(+) (pilG) [Pseudomonas aeruginosa strain IPA34]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=870804 RBB89_RS02175 WP_003084583.1 472256..472663(+) (pilG) [Pseudomonas aeruginosa strain IPA34]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385