Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | RA083_RS06295 | Genome accession | NZ_CP132557 |
| Coordinates | 1276553..1277527 (+) | Length | 324 a.a. |
| NCBI ID | WP_011303021.1 | Uniprot ID | A0A380HM33 |
| Organism | Staphylococcus saprophyticus strain SZ.PL35w | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1271553..1282527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RA083_RS06260 (RA083_06270) | rpmG | 1271973..1272122 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| RA083_RS06265 (RA083_06275) | - | 1272331..1272876 (+) | 546 | WP_041080616.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| RA083_RS06270 (RA083_06280) | - | 1272888..1274345 (+) | 1458 | WP_306505359.1 | rhomboid family intramembrane serine protease | - |
| RA083_RS06275 (RA083_06285) | - | 1274329..1274526 (+) | 198 | WP_041080619.1 | YqgQ family protein | - |
| RA083_RS06280 (RA083_06290) | - | 1274530..1275516 (+) | 987 | WP_069822014.1 | glucokinase | - |
| RA083_RS06285 (RA083_06295) | - | 1275516..1275842 (+) | 327 | WP_002483185.1 | MTH1187 family thiamine-binding protein | - |
| RA083_RS06290 (RA083_06300) | - | 1275842..1276465 (+) | 624 | WP_069822013.1 | MBL fold metallo-hydrolase | - |
| RA083_RS06295 (RA083_06305) | comGA | 1276553..1277527 (+) | 975 | WP_011303021.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RA083_RS06300 (RA083_06310) | comGB | 1277499..1278563 (+) | 1065 | WP_041080625.1 | competence type IV pilus assembly protein ComGB | - |
| RA083_RS06305 (RA083_06315) | comGC | 1278591..1278902 (+) | 312 | WP_037538386.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RA083_RS06310 (RA083_06320) | - | 1278925..1279338 (+) | 414 | WP_052463703.1 | hypothetical protein | - |
| RA083_RS06315 (RA083_06325) | comGF | 1279596..1280039 (+) | 444 | WP_069825889.1 | competence type IV pilus minor pilin ComGF | - |
| RA083_RS06320 (RA083_06330) | - | 1280243..1280716 (+) | 474 | WP_002483192.1 | shikimate kinase | - |
| RA083_RS06325 (RA083_06335) | gcvT | 1280900..1281991 (+) | 1092 | WP_041080630.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36606.84 Da Isoelectric Point: 9.7041
>NTDB_id=869452 RA083_RS06295 WP_011303021.1 1276553..1277527(+) (comGA) [Staphylococcus saprophyticus strain SZ.PL35w]
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
Nucleotide
Download Length: 975 bp
>NTDB_id=869452 RA083_RS06295 WP_011303021.1 1276553..1277527(+) (comGA) [Staphylococcus saprophyticus strain SZ.PL35w]
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACAGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACAGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.037 |
100 |
0.62 |
| comGA | Staphylococcus aureus N315 |
62.037 |
100 |
0.62 |