Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LACZS1_RS07595 Genome accession   NZ_CP132484
Coordinates   1589263..1590504 (+) Length   413 a.a.
NCBI ID   WP_070650426.1    Uniprot ID   -
Organism   Lacticaseibacillus zeae subsp. silagei strain NCIMB 15474     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1584263..1595504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LACZS1_RS07570 (LACZS1_001511) tsf 1584728..1585609 (+) 882 WP_047106254.1 translation elongation factor Ts -
  LACZS1_RS07575 (LACZS1_001512) pyrH 1585835..1586554 (+) 720 WP_010488080.1 UMP kinase -
  LACZS1_RS07580 (LACZS1_001513) frr 1586554..1587111 (+) 558 WP_010488081.1 ribosome recycling factor -
  LACZS1_RS07585 (LACZS1_001514) - 1587670..1588422 (+) 753 WP_070650427.1 isoprenyl transferase -
  LACZS1_RS07590 (LACZS1_001515) - 1588458..1589246 (+) 789 WP_010488089.1 phosphatidate cytidylyltransferase -
  LACZS1_RS07595 (LACZS1_001516) eeP 1589263..1590504 (+) 1242 WP_070650426.1 RIP metalloprotease RseP Regulator
  LACZS1_RS07600 (LACZS1_001517) - 1590528..1592258 (+) 1731 WP_070650425.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45350.02 Da        Isoelectric Point: 8.0451

>NTDB_id=869257 LACZS1_RS07595 WP_070650426.1 1589263..1590504(+) (eeP) [Lacticaseibacillus zeae subsp. silagei strain NCIMB 15474]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDDEDDIKPG
TMLSLILNDAGKVVRINASDKTTLEGGMPVQVSRVDLVKDLVIEGYPNGDEATLQSWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFILAILTFIIYGLIFGVQILNTNQVGNVLPDYPAAQAGLKSNARVESIDDKKIHSFTDL
STQVSKHAGKSVMFTVKQDGKTQNIAIKPDKKGKIGVMVPVEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLAGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=869257 LACZS1_RS07595 WP_070650426.1 1589263..1590504(+) (eeP) [Lacticaseibacillus zeae subsp. silagei strain NCIMB 15474]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTCTACTTTGCAAA
ACGCAGCGGTATTCTGGTGCGTGAATTTTCGATTGGCATGGGGCCTAAGCTGTGGGCGTCGCATAAAAATAATACGACCT
ATACATTGCGCTTGTTGCCACTGGGCGGTTATGTGCGTATGGCAGGCTGGCAGGATGATGAAGATGATATCAAACCAGGC
ACGATGCTGAGCCTGATTTTGAACGATGCCGGTAAAGTTGTCCGCATTAATGCCAGCGACAAAACCACATTAGAAGGTGG
CATGCCGGTTCAGGTCAGTCGCGTCGATTTGGTTAAGGATCTTGTCATCGAAGGTTATCCAAATGGTGATGAAGCGACCT
TGCAGAGCTGGCAAGTTGATCATGACGCCACCATCATCGAAGAAGATGGCACGGAAGTCCAGATTGCGCCGGAAGACGTG
CAATTTCAAAATGCACCGGTTTGGCGGCGGCTCTTGGTCAATTTTGCTGGACCGATGAATAACTTTATTCTCGCTATTTT
GACGTTCATCATTTATGGCCTGATTTTTGGTGTGCAGATTTTAAACACCAATCAAGTCGGAAACGTTCTTCCCGATTATC
CGGCTGCCCAAGCAGGACTTAAATCGAATGCTAGAGTTGAGTCGATTGACGACAAAAAGATCCATTCATTTACGGACCTT
TCAACTCAGGTCAGCAAGCATGCCGGCAAATCAGTCATGTTTACTGTCAAGCAGGATGGCAAAACGCAAAATATTGCGAT
TAAACCGGATAAGAAAGGCAAGATTGGCGTGATGGTGCCCGTTGAGAAGTCACCGGCGCGCGCCTTTACTTATGGGTTTA
CCCAAACATGGGATCTAGCTGTTCGTACTTGGGATGTCTTGAAGTCAATGGTCACTGGTGGATTTTCACTCAATAAGCTC
GCCGGGCCGGTTGGCATTTATACCATGACCAGCCAAAGTGCTAAGGGCGGGCTTGCCGGCTTGCTGTTCTTCATGGGTTA
CCTAAGTCTTGGCTTGGGTATTTCAAACCTACTGCCGATTCCGGTCTTGGACGGCGGGAAAATTCTATTAAACCTAATCG
AAATCATTCGGCGTAAGCCACTCAAACCGGAAACTGAAGGTGTAGTCACGATGATCGGTCTGGGTTTGATGGTCTTGTTG
ATGCTCGCCGTCACGATTAATGACATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(205-268)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.533

100

0.513
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501