Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LACPH_RS07295 Genome accession   NZ_CP132482
Coordinates   1558726..1559967 (-) Length   413 a.a.
NCBI ID   WP_306386513.1    Uniprot ID   -
Organism   Lacticaseibacillus parahuelsenbergensis strain NCIMB 15471     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1553726..1564967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LACPH_RS07290 (LACPH_001457) - 1556972..1558702 (-) 1731 WP_087912226.1 proline--tRNA ligase -
  LACPH_RS07295 (LACPH_001458) eeP 1558726..1559967 (-) 1242 WP_306386513.1 RIP metalloprotease RseP Regulator
  LACPH_RS07300 (LACPH_001459) - 1559984..1560772 (-) 789 WP_010488089.1 phosphatidate cytidylyltransferase -
  LACPH_RS07305 (LACPH_001460) - 1560808..1561560 (-) 753 WP_306386514.1 isoprenyl transferase -
  LACPH_RS07310 (LACPH_001461) frr 1561933..1562490 (-) 558 WP_010488081.1 ribosome recycling factor -
  LACPH_RS07315 (LACPH_001462) pyrH 1562490..1563209 (-) 720 WP_010488080.1 UMP kinase -
  LACPH_RS07320 (LACPH_001463) tsf 1563436..1564317 (-) 882 WP_306386515.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45292.96 Da        Isoelectric Point: 8.0451

>NTDB_id=869191 LACPH_RS07295 WP_306386513.1 1558726..1559967(-) (eeP) [Lacticaseibacillus parahuelsenbergensis strain NCIMB 15471]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDDEDDIKPG
TMLSLILNDAGKVVRINASDKTTLEGGMPVQVSRVDLVKDLIIEGYPNGDEDALQSWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFILAILTFVIYGLIFGVQILNTNQVGTVLPDYPAAQAGLKSNARVESIDGKKIHSFTDL
STQVSKHAGKSVMFTVKQDGKTQNIAIKPDKKGKIGVMVPVEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLAGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=869191 LACPH_RS07295 WP_306386513.1 1558726..1559967(-) (eeP) [Lacticaseibacillus parahuelsenbergensis strain NCIMB 15471]
ATGACCACAATCATTGCTTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTCTACTTTGCAAA
ACGCAGCGGTATTCTGGTGCGTGAATTTTCGATTGGCATGGGTCCAAAGCTTTGGGCGTCACATAAGAATAATACGACCT
ACACATTGCGCCTGTTGCCACTGGGCGGTTATGTGCGTATGGCAGGCTGGCAGGACGATGAAGATGATATCAAACCGGGC
ACGATGCTGAGCTTGATTTTGAACGATGCCGGTAAAGTTGTCCGCATTAATGCCAGTGACAAAACAACATTAGAAGGCGG
CATGCCGGTTCAGGTCAGTCGCGTCGATTTGGTCAAGGACCTTATCATCGAAGGCTATCCGAATGGTGATGAAGATGCCT
TGCAAAGTTGGCAGGTTGATCATGACGCCACTATCATCGAAGAAGATGGCACAGAAGTCCAGATTGCGCCGGAAGACGTG
CAATTTCAAAATGCACCGGTTTGGCGGCGGCTCTTGGTCAATTTTGCCGGACCGATGAATAACTTTATTCTCGCTATTTT
GACGTTCGTCATTTATGGCCTGATTTTTGGTGTGCAGATTTTGAATACTAATCAGGTTGGAACCGTTCTTCCCGACTATC
CGGCTGCCCAAGCAGGACTTAAATCGAATGCTAGGGTTGAATCCATCGATGGTAAGAAGATTCATTCATTTACGGATCTT
TCAACACAGGTCAGCAAACATGCCGGCAAATCAGTCATGTTTACCGTCAAACAGGATGGCAAAACGCAAAATATTGCGAT
TAAACCGGATAAGAAAGGCAAGATTGGCGTGATGGTGCCCGTTGAGAAGTCACCGGCGCGCGCCTTTACTTATGGGTTTA
CCCAGACATGGGATCTAGCTGTTCGTACATGGGATGTCTTGAAGTCAATGGTCACTGGCGGTTTTTCACTTAATAAATTG
GCCGGGCCGGTTGGTATTTATACCATGACCAGCCAAAGTGCTAAAGGTGGACTGGCTGGCTTGTTGTTCTTCATGGGTTA
CCTAAGCCTTGGTTTGGGCATTTCCAACCTACTGCCGATTCCGGTCTTGGACGGCGGGAAAATTCTATTAAACCTGATCG
AAATCATTCGGCGCAAACCACTCAAACCGGAAACTGAAGGTGTGGTCACGATGATCGGTCTGGGTTTGATGGTCTTGCTG
ATGCTCGCCGTCACGATTAATGACATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(206-268)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.592

100

0.501
  eeP Streptococcus thermophilus LMD-9

48.471

100

0.499