Detailed information NTG0868499

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: RAM28_RS08570
• Genome accession: NZ_CP132362
• Coordinates: 1704063..1704374 (+)
• Length: 103 a.a.
• NCBI ID: WP_031786220.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain UNC_SA55
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1699063..1709374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAM28_RS08540 (RAM28_08525)	-	1699846..1700049 (+)	204	WP_000087561.1	YqgQ family protein	-
RAM28_RS08545 (RAM28_08530)	-	1700046..1701032 (+)	987	WP_000161311.1	ROK family glucokinase	-
RAM28_RS08550 (RAM28_08535)	-	1701032..1701361 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
RAM28_RS08555 (RAM28_08540)	-	1701358..1701981 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
RAM28_RS08560 (RAM28_08545)	comGA	1702033..1703007 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
RAM28_RS08565 (RAM28_08550)	comGB	1702979..1704049 (+)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
RAM28_RS08570 (RAM28_08555)	comGC	1704063..1704374 (+)	312	WP_031786220.1	competence type IV pilus major pilin ComGC	Machinery gene
RAM28_RS08575 (RAM28_08560)	comGD	1704352..1704798 (+)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
RAM28_RS08580 (RAM28_08565)	comGE	1704785..1705084 (+)	300	WP_000844410.1	hypothetical protein	Machinery gene
RAM28_RS08585 (RAM28_08570)	comGF	1705002..1705499 (+)	498	WP_001788897.1	competence type IV pilus minor pilin ComGF	Machinery gene
RAM28_RS08590 (RAM28_08575)	-	1705596..1705742 (+)	147	WP_001792109.1	hypothetical protein	-
RAM28_RS08595 (RAM28_08580)	-	1705732..1706256 (+)	525	WP_001015120.1	shikimate kinase	-
RAM28_RS08600 (RAM28_08585)	gcvT	1706415..1707506 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
RAM28_RS08605 (RAM28_08590)	gcvPA	1707526..1708872 (+)	1347	WP_000019691.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11297.32 Da
• Isoelectric Point: 8.5268

>NTDB_id=868499 RAM28_RS08570 WP_031786220.1 1704063..1704374(+) (comGC) [Staphylococcus aureus strain UNC_SA55]
MFKFLKKTQAFTLIEILLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=868499 RAM28_RS08570 WP_031786220.1 1704063..1704374(+) (comGC) [Staphylococcus aureus strain UNC_SA55]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATACTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	99.029	100	0.99
comGC	Staphylococcus aureus MW2	99.029	100	0.99
comGC/cglC	Streptococcus pneumoniae Rx1	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae D39	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae R6	45.098	99.029	0.447
comGC/cglC	Streptococcus pneumoniae TIGR4	45.098	99.029	0.447
comGC/cglC	Streptococcus mitis NCTC 12261	50	83.495	0.417
comGC/cglC	Streptococcus mitis SK321	50	83.495	0.417
comYC	Streptococcus gordonii str. Challis substr. CH1	41.837	95.146	0.398
comYC	Streptococcus suis isolate S10	48.718	75.728	0.369