Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   K6J89_RS17060 Genome accession   NZ_AP024621
Coordinates   3236950..3237849 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis strain BEST3095     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3231950..3242849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6J89_RS17025 (BsBEST3095_32510) mrpE 3232190..3232666 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  K6J89_RS17030 (BsBEST3095_32520) mrpF 3232666..3232950 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  K6J89_RS17035 (BsBEST3095_32530) mnhG 3232934..3233308 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  K6J89_RS17040 (BsBEST3095_32540) yuxO 3233347..3233727 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  K6J89_RS17045 (BsBEST3095_32550) comA 3233746..3234390 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  K6J89_RS17050 comP 3234471..3236780 (-) 2310 WP_032723438.1 two-component system sensor histidine kinase ComP Regulator
  K6J89_RS17055 (BsBEST3095_32580) comX 3236795..3236962 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  K6J89_RS17060 (BsBEST3095_32590) comQ 3236950..3237849 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  K6J89_RS17065 (BsBEST3095_32600) degQ 3238034..3238174 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  K6J89_RS17070 - 3238396..3238521 (+) 126 WP_003228793.1 hypothetical protein -
  K6J89_RS17075 (BsBEST3095_32610) - 3238635..3239003 (+) 369 WP_003243784.1 hypothetical protein -
  K6J89_RS17080 (BsBEST3095_32620) pdeH 3238979..3240208 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  K6J89_RS17085 (BsBEST3095_32630) pncB 3240345..3241817 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  K6J89_RS17090 (BsBEST3095_32640) pncA 3241833..3242384 (-) 552 WP_003243099.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=86801 K6J89_RS17060 WP_003243039.1 3236950..3237849(-) (comQ) [Bacillus subtilis strain BEST3095]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=86801 K6J89_RS17060 WP_003243039.1 3236950..3237849(-) (comQ) [Bacillus subtilis strain BEST3095]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment