Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   Q9Q93_RS08125 Genome accession   NZ_CP132232
Coordinates   1732385..1733011 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain RSY19     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1727385..1738011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9Q93_RS08105 (Q9Q93_08105) - 1727785..1729545 (-) 1761 WP_017384808.1 Lon protease family protein -
  Q9Q93_RS08110 (Q9Q93_08110) matP 1729732..1730184 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  Q9Q93_RS08115 (Q9Q93_08115) ompA 1730250..1731302 (-) 1053 WP_017694761.1 porin OmpA -
  Q9Q93_RS08120 (Q9Q93_08120) sulA 1731658..1732167 (-) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  Q9Q93_RS08125 (Q9Q93_08125) sxy/tfoX 1732385..1733011 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  Q9Q93_RS08130 (Q9Q93_08130) yccS 1732968..1735130 (-) 2163 WP_063136402.1 YccS family putative transporter -
  Q9Q93_RS08135 (Q9Q93_08135) - 1735149..1735595 (-) 447 WP_003858149.1 YccF domain-containing protein -
  Q9Q93_RS08140 (Q9Q93_08140) helD 1735718..1737772 (+) 2055 WP_047057584.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=867936 Q9Q93_RS08125 WP_017384804.1 1732385..1733011(+) (sxy/tfoX) [Enterobacter hormaechei strain RSY19]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=867936 Q9Q93_RS08125 WP_017384804.1 1732385..1733011(+) (sxy/tfoX) [Enterobacter hormaechei strain RSY19]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572