Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   Q9318_RS10395 Genome accession   NZ_CP132229
Coordinates   2151630..2152832 (+) Length   400 a.a.
NCBI ID   WP_003100537.1    Uniprot ID   A0A1S1XXM8
Organism   Streptococcus iniae strain BH16-24     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2146630..2157832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9318_RS10365 (Q9318_10365) - 2147624..2150218 (+) 2595 WP_003100534.1 YfhO family protein -
  Q9318_RS10380 (Q9318_10380) - 2150545..2150661 (-) 117 Protein_1991 IS30 family transposase -
  Q9318_RS10390 (Q9318_10390) rlmH 2151005..2151484 (-) 480 WP_003100536.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  Q9318_RS10395 (Q9318_10395) htrA 2151630..2152832 (+) 1203 WP_003100537.1 S1C family serine protease Regulator
  Q9318_RS10400 (Q9318_10400) spo0J 2152911..2153684 (+) 774 WP_016356271.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 400 a.a.        Molecular weight: 42463.20 Da        Isoelectric Point: 6.7483

>NTDB_id=867867 Q9318_RS10395 WP_003100537.1 2151630..2152832(+) (htrA) [Streptococcus iniae strain BH16-24]
MSHFKNIYKLIWVLLAGFLGGFFAFIVINTFNQKTSTQETIISNPTKTSKVTYKNTTNTTKAVKVIQNAVVSVLNYQAVD
TNTSNPASQLFGQENDLKKDDGLALFSEGSGVIYKKDDKSAYLVTNNHVIDGAKRIEILLADGSKVVGKLVGSDTYSDLA
VVKISADKIKSIGEFADSTKINVGEVAIAIGSPLGSEYANSVTEGIVSSLSRTVTLKNEEGQTVSTNALQTDAAINPGNS
GGPLINIEGQIIGINSSKISSGSNGGAVEGMGFAIPSNDVLKIINQLEGKGEVIRPALGISMVNLGDLSTNAISQLKIPK
DLTGGIVVASVKEGMPASGKLEQYDIITEINGKAVTTTSDLQSELYGHNIDDSIKITFYRGKDKKTDTIKLTKTTKDLEK

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=867867 Q9318_RS10395 WP_003100537.1 2151630..2152832(+) (htrA) [Streptococcus iniae strain BH16-24]
ATGTCACATTTTAAAAATATATACAAATTAATTTGGGTTCTTTTGGCAGGCTTTTTAGGTGGTTTTTTTGCATTTATAGT
TATTAATACCTTTAATCAAAAAACTTCTACACAAGAGACAATTATTTCAAATCCTACTAAAACAAGTAAAGTAACTTATA
AAAACACAACTAATACAACTAAAGCGGTAAAGGTTATCCAAAATGCTGTTGTATCTGTGCTCAATTATCAAGCAGTTGAT
ACAAATACGTCAAATCCTGCAAGTCAACTTTTTGGACAAGAAAATGATTTAAAAAAAGATGACGGGCTAGCTCTTTTTAG
TGAAGGATCTGGTGTCATTTATAAAAAAGATGATAAATCTGCTTATTTAGTAACAAATAATCATGTTATTGATGGTGCTA
AACGAATTGAAATTCTACTAGCTGATGGTTCTAAAGTTGTTGGAAAATTAGTTGGTTCTGATACTTATTCAGATTTAGCT
GTTGTTAAAATTTCAGCTGATAAAATTAAATCTATTGGAGAATTTGCTGACTCTACAAAAATAAATGTTGGTGAAGTTGC
AATTGCTATTGGTAGCCCACTGGGATCTGAATATGCTAATTCCGTAACAGAAGGTATTGTTTCAAGTCTTAGCAGAACAG
TTACTCTAAAAAATGAAGAAGGACAGACCGTTTCAACAAATGCTCTACAAACAGATGCAGCAATTAATCCTGGTAATTCA
GGTGGTCCATTAATCAATATTGAAGGGCAAATTATTGGGATTAATTCAAGTAAAATTTCTTCAGGTTCAAATGGAGGAGC
TGTCGAAGGAATGGGATTTGCAATTCCTTCCAATGACGTTCTTAAAATTATTAATCAACTTGAAGGAAAAGGAGAAGTGA
TTCGTCCTGCCTTAGGCATTTCAATGGTTAATCTTGGTGATCTGTCAACAAATGCAATTAGCCAATTAAAGATTCCAAAG
GACTTAACAGGTGGTATTGTTGTCGCATCTGTCAAAGAAGGGATGCCTGCTTCAGGAAAACTTGAGCAATACGATATTAT
TACAGAAATTAATGGCAAAGCTGTCACTACAACAAGTGATCTTCAAAGTGAATTATATGGACATAATATTGACGACTCAA
TCAAAATAACTTTCTATAGAGGAAAAGATAAGAAAACAGATACCATCAAACTAACAAAGACAACTAAAGATTTAGAAAAA
TAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1S1XXM8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

62.025

98.75

0.612

  htrA Streptococcus mitis NCTC 12261

54.208

100

0.548

  htrA Streptococcus gordonii str. Challis substr. CH1

54.637

99.75

0.545

  htrA Streptococcus pneumoniae TIGR4

53.96

100

0.545

  htrA Streptococcus pneumoniae D39

53.96

100

0.545

  htrA Streptococcus pneumoniae Rx1

53.96

100

0.545

  htrA Streptococcus pneumoniae R6

53.96

100

0.545