Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q9G97_RS11045 Genome accession   NZ_CP132194
Coordinates   2617457..2617849 (-) Length   130 a.a.
NCBI ID   WP_201570102.1    Uniprot ID   -
Organism   Psychrobacter sp. M13     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2612457..2622849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q9G97_RS11030 (Q9G97_11030) - 2615053..2616072 (-) 1020 Protein_2162 methyl-accepting chemotaxis protein -
  Q9G97_RS11035 (Q9G97_11035) - 2616428..2616958 (-) 531 WP_201570100.1 chemotaxis protein CheW -
  Q9G97_RS11040 (Q9G97_11040) - 2616962..2617324 (-) 363 WP_305898856.1 PleD family two-component system response regulator -
  Q9G97_RS11045 (Q9G97_11045) pilG 2617457..2617849 (-) 393 WP_201570102.1 twitching motility response regulator PilG Regulator
  Q9G97_RS11050 (Q9G97_11050) - 2618335..2619630 (+) 1296 WP_305898857.1 efflux RND transporter periplasmic adaptor subunit -
  Q9G97_RS11055 (Q9G97_11055) - 2619915..2620637 (+) 723 WP_201570104.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14557.68 Da        Isoelectric Point: 4.7317

>NTDB_id=867545 Q9G97_RS11045 WP_201570102.1 2617457..2617849(-) (pilG) [Psychrobacter sp. M13]
MENNFEGLKVMVIDDSKTIRRTAETLLQRAGCEVITAVDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPSYA
SKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFDAINKYRDTVQS

Nucleotide


Download         Length: 393 bp        

>NTDB_id=867545 Q9G97_RS11045 WP_201570102.1 2617457..2617849(-) (pilG) [Psychrobacter sp. M13]
ATGGAAAATAATTTTGAAGGGCTAAAGGTGATGGTTATTGATGATTCAAAAACTATCCGCCGTACGGCAGAGACTTTACT
ACAACGAGCAGGCTGTGAAGTCATTACTGCCGTCGATGGTTTTGATGCCTTAGCAAAGATTGTGGATAATAATCCAGATA
TCATTTTTGTCGATATTATGATGCCACGTCTTGATGGCTACCAGACCTGTGCTTTGATAAAAAATAATCCAAGTTACGCC
AGCAAGCCCGTTATTATGCTGTCATCAAAGGATGGCTTATTTGACAAAGCTCGTGGGCGCATTGTTGGCTCTGATGAATA
TTTGACTAAGCCTTTTAGTAAAGATGAGCTATTTGACGCCATTAATAAGTATCGCGATACGGTTCAGTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

79.839

95.385

0.762
  vicR Streptococcus mutans UA159

40.517

89.231

0.362