Detailed information NTG0867033

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: Q8W18_RS05905
• Genome accession: NZ_CP132058
• Coordinates: 1190636..1191598 (+)
• Length: 320 a.a.
• NCBI ID: WP_306011992.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain F12-21
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1185636..1196598

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q8W18_RS05875 (Q8W18_05875)	argF	1185966..1186916 (+)	951	WP_144462346.1	ornithine carbamoyltransferase	-
Q8W18_RS05880 (Q8W18_05880)	-	1187019..1187198 (+)	180	WP_003211282.1	YjzC family protein	-
Q8W18_RS05885 (Q8W18_05885)	-	1187368..1188633 (+)	1266	WP_306011990.1	MFS transporter	-
Q8W18_RS05890 (Q8W18_05890)	-	1188748..1188942 (-)	195	WP_003211779.1	YjzD family protein	-
Q8W18_RS05895 (Q8W18_05895)	-	1189154..1189894 (+)	741	WP_169056282.1	hypothetical protein	-
Q8W18_RS05900 (Q8W18_05900)	-	1189970..1190545 (+)	576	WP_306011991.1	nad binding enzyme	-
Q8W18_RS05905 (Q8W18_05905)	med	1190636..1191598 (+)	963	WP_306011992.1	BMP family ABC transporter substrate-binding protein	Regulator
Q8W18_RS05910 (Q8W18_05910)	comZ	1191609..1191806 (+)	198	WP_169056285.1	ComZ family protein	Regulator
Q8W18_RS05915 (Q8W18_05915)	-	1191817..1192050 (-)	234	WP_058014311.1	hypothetical protein	-
Q8W18_RS05920 (Q8W18_05920)	-	1192220..1193158 (+)	939	WP_012009552.1	beta-ketoacyl-ACP synthase III	-
Q8W18_RS05925 (Q8W18_05925)	fabF	1193180..1194421 (+)	1242	WP_169056286.1	beta-ketoacyl-ACP synthase II	-
Q8W18_RS05930 (Q8W18_05930)	-	1194498..1195301 (+)	804	WP_306011993.1	DUF2268 domain-containing protein	-
Q8W18_RS05935 (Q8W18_05935)	-	1195462..1196442 (+)	981	WP_306011994.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35632.58 Da
• Isoelectric Point: 5.2654

>NTDB_id=867033 Q8W18_RS05905 WP_306011992.1 1190636..1191598(+) (med) [Bacillus pumilus strain F12-21]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPEADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYGIIAKKFNEGKLNAQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIAIYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=867033 Q8W18_RS05905 WP_306011992.1 1190636..1191598(+) (med) [Bacillus pumilus strain F12-21]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACTATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAATTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTGAGGCGGATAATGTTGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCTGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAAGGCGTAGATGTTGTATATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACCGATCAATCC
AACCTCGGCAGCCATACCGTTTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACGGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGCACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCTA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATAGCGATTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-319)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	63.578	97.813	0.622