Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE1441   Type   Regulator
Locus tag   WHQ26_RS06670 Genome accession   NZ_CP148155
Coordinates   1286754..1287374 (+) Length   206 a.a.
NCBI ID   WP_265606999.1    Uniprot ID   -
Organism   Campylobacter jejuni strain Z1323HCJ0069     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1281754..1292374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHQ26_RS06625 (WHQ26_06625) - 1282303..1282668 (+) 366 WP_338851117.1 hypothetical protein -
  WHQ26_RS06630 (WHQ26_06630) - 1282805..1282954 (+) 150 WP_265606997.1 hypothetical protein -
  WHQ26_RS06635 (WHQ26_06635) - 1282951..1283139 (-) 189 WP_221676718.1 hypothetical protein -
  WHQ26_RS06640 (WHQ26_06640) - 1283136..1283354 (-) 219 WP_002826741.1 hypothetical protein -
  WHQ26_RS06645 (WHQ26_06645) - 1283466..1284199 (+) 734 Protein_1285 S24 family peptidase -
  WHQ26_RS06650 (WHQ26_06650) - 1284196..1284663 (+) 468 WP_338851118.1 hypothetical protein -
  WHQ26_RS06655 (WHQ26_06655) - 1285267..1285647 (+) 381 WP_052799449.1 hypothetical protein -
  WHQ26_RS06660 (WHQ26_06660) - 1285644..1286300 (+) 657 WP_052799450.1 hypothetical protein -
  WHQ26_RS06665 (WHQ26_06665) - 1286316..1286747 (+) 432 WP_052799451.1 protein-export chaperone SecB -
  WHQ26_RS06670 (WHQ26_06670) CJE1441 1286754..1287374 (+) 621 WP_265606999.1 DNA/RNA non-specific endonuclease Regulator
  WHQ26_RS06675 (WHQ26_06675) - 1287575..1288102 (-) 528 WP_338851120.1 hypothetical protein -
  WHQ26_RS06680 (WHQ26_06680) - 1288259..1288450 (+) 192 WP_002783990.1 hypothetical protein -
  WHQ26_RS06685 (WHQ26_06685) - 1288431..1288580 (-) 150 WP_002810114.1 hypothetical protein -
  WHQ26_RS06690 (WHQ26_06690) - 1288632..1288904 (+) 273 WP_002786773.1 hypothetical protein -
  WHQ26_RS06695 (WHQ26_06695) - 1289466..1289735 (+) 270 WP_002783984.1 hypothetical protein -
  WHQ26_RS06700 (WHQ26_06700) - 1289726..1289983 (+) 258 WP_057035888.1 hypothetical protein -
  WHQ26_RS06705 (WHQ26_06705) - 1289974..1290201 (+) 228 WP_265607001.1 helix-turn-helix domain-containing protein -
  WHQ26_RS06710 (WHQ26_06710) - 1290203..1291057 (+) 855 WP_011049697.1 YqaJ viral recombinase family protein -
  WHQ26_RS06715 (WHQ26_06715) - 1291059..1291796 (+) 738 WP_107840713.1 hypothetical protein -

Sequence


Protein


Download         Length: 206 a.a.        Molecular weight: 24068.52 Da        Isoelectric Point: 9.7686

>NTDB_id=866418 WHQ26_RS06670 WP_265606999.1 1286754..1287374(+) (CJE1441) [Campylobacter jejuni strain Z1323HCJ0069]
MKKLIILPLLATLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPINISDTEIIDFEINNNLILKNIAIKNKISGKIDLYNF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=866418 WHQ26_RS06670 WP_265606999.1 1286754..1287374(+) (CJE1441) [Campylobacter jejuni strain Z1323HCJ0069]
ATGAAAAAACTTATAATCTTACCACTGCTAGCAACTCTAGCCTTAGCTGATTATACACAATACAAGCCAAGCGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGCTATGATTATAATCTAA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCAGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACCCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTATTAATATTAGTGATACAGAAATTATAGACTTTGAAATTAATAATAATTTGAT
ATTAAAAAATATAGCTATTAAAAATAAAATATCAGGCAAAATAGATTTATATAATTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

93.023

83.495

0.777

  CJE0566 Campylobacter jejuni RM1221

92.442

83.495

0.772