Detailed information NTG0866382

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: Q4S45_RS17075
• Genome accession: NZ_CP131935
• Coordinates: 3732477..3733874 (-)
• Length: 465 a.a.
• NCBI ID: WP_305506299.1
• Uniprot ID: A0AAT9WCT2
• Organism: Massilia sp. R2A-15
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3727477..3738874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q4S45_RS17065 (Q4S45_17065)	-	3728593..3731514 (-)	2922	WP_305506295.1	ribonucleoside-diphosphate reductase subunit alpha	-
Q4S45_RS17070 (Q4S45_17070)	ampD	3731818..3732480 (-)	663	WP_305506297.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
Q4S45_RS17075 (Q4S45_17075)	pilR	3732477..3733874 (-)	1398	WP_305506299.1	sigma-54 dependent transcriptional regulator	Regulator
Q4S45_RS17080 (Q4S45_17080)	-	3733890..3735548 (-)	1659	WP_305506301.1	PAS domain-containing sensor histidine kinase	-
Q4S45_RS17085 (Q4S45_17085)	-	3735553..3735798 (-)	246	WP_305506303.1	PP0621 family protein	-
Q4S45_RS17090 (Q4S45_17090)	-	3735795..3736598 (-)	804	WP_305506305.1	inner membrane protein YpjD	-
Q4S45_RS17095 (Q4S45_17095)	-	3736731..3737528 (-)	798	WP_305506307.1	ABC transporter ATP-binding protein	-
Q4S45_RS17100 (Q4S45_17100)	-	3737529..3738344 (-)	816	WP_305506309.1	ABC transporter permease	-

Sequence

Protein

• Length: 465 a.a.
• Molecular weight: 49563.97 Da
• Isoelectric Point: 4.8221

>NTDB_id=866382 Q4S45_RS17075 WP_305506299.1 3732477..3733874(-) (pilR) [Massilia sp. R2A-15]
MTSPRILVVDDEADLRELLDITLVKMGLDVDSAENLREARALFAANDYALVLTDMRLPDGLGLELVREVAASGKGTPIAV
VTAYGSADNAVVALKAGAFDYVSKPVVLDDLRVMVRSALRLAPAAGQAAPGAAAPSRLIGDSPAMQGLRAQIGRLARSMA
PIAISGESGSGKELAAREIHAQSSRAARPFIAVNCGAIPEQLMEAEFFGYRKGAFTGAADERDGFFQAANGGTLMLDEVA
DLPLAMQVKLLRAIQERRVRKIGATAEEPVDVRIISATHKDLARCVERGEFRQDLFYRLNVIELTLPPLRERLGDLAVLT
DGILARLAGPGQKAVLGPGVLDALCAYSFPGNVRELENVLERALAFANDGVIEVGDLSLKSARVAEAAPAPPPVPTPAAA
PEPAAAAGDLPSDLPGYLAQVERDIILRALIQTQFNRTQAAQLLGISFRQLRYQMQKLDIQEPEQ

Nucleotide

• Length: 1398 bp

>NTDB_id=866382 Q4S45_RS17075 WP_305506299.1 3732477..3733874(-) (pilR) [Massilia sp. R2A-15]
ATGACTTCACCCCGCATCCTGGTCGTCGACGACGAAGCCGACCTGCGCGAACTGCTCGACATCACCCTGGTGAAGATGGG
CCTGGACGTCGACAGCGCGGAGAACCTGCGCGAGGCGCGCGCGCTGTTCGCCGCCAACGACTACGCGCTGGTGCTGACCG
ACATGCGCCTGCCCGACGGCCTGGGCCTGGAGCTGGTGCGCGAAGTGGCGGCCAGCGGCAAGGGCACGCCGATCGCCGTC
GTCACCGCCTACGGCAGCGCCGACAACGCGGTGGTCGCGCTCAAAGCCGGCGCTTTCGACTACGTCTCCAAGCCGGTGGT
GCTGGACGACCTGCGCGTGATGGTGCGCTCGGCGCTGCGCCTGGCGCCGGCAGCCGGCCAGGCCGCACCAGGCGCCGCCG
CGCCCAGCCGCCTCATCGGCGACTCGCCGGCGATGCAGGGCCTGCGCGCGCAGATCGGCCGGCTGGCGCGCTCGATGGCG
CCGATCGCCATTTCCGGCGAGTCGGGCAGCGGCAAGGAACTGGCGGCGCGCGAGATCCACGCCCAAAGCTCGCGCGCGGC
GCGGCCCTTCATCGCGGTCAACTGCGGCGCGATTCCCGAGCAGTTGATGGAAGCGGAGTTTTTCGGCTACCGCAAGGGAG
CCTTCACCGGCGCGGCCGACGAGCGCGACGGCTTCTTCCAGGCGGCCAACGGCGGCACCCTGATGCTCGACGAGGTGGCC
GACCTGCCGCTGGCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAGCGGCGCGTGCGCAAGATCGGCGCCACGGCGGA
GGAGCCGGTGGACGTGCGCATCATCAGCGCCACCCACAAGGACCTGGCCAGGTGCGTCGAGCGCGGCGAGTTCCGCCAGG
ACTTGTTCTACCGCCTGAACGTGATCGAGCTGACCCTGCCTCCGCTGCGCGAACGGCTCGGCGACCTGGCCGTGCTCACC
GACGGCATCCTGGCGCGGCTGGCCGGACCGGGGCAGAAGGCGGTGCTCGGCCCCGGCGTGCTCGACGCCCTGTGCGCCTA
CTCCTTCCCCGGCAACGTGCGCGAACTGGAAAACGTGCTTGAACGCGCGCTGGCGTTCGCCAACGACGGCGTGATCGAGG
TGGGCGACCTGTCGCTGAAAAGCGCGCGCGTGGCCGAAGCCGCGCCGGCGCCGCCGCCCGTGCCAACGCCTGCCGCGGCG
CCGGAGCCGGCCGCCGCGGCAGGCGATTTGCCGAGCGACCTGCCGGGCTACCTGGCCCAGGTCGAGCGCGACATCATCCT
GCGCGCGCTGATCCAGACCCAGTTCAACCGCACCCAGGCCGCGCAGCTGCTCGGCATCAGCTTCCGCCAGCTGCGCTACC
AGATGCAGAAGCTCGACATCCAGGAGCCGGAACAATGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Bacterial regulatory protein, Fis family (HTH_8) (418-458)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	54.978	99.355	0.546
pilR	Acinetobacter baumannii strain A118	45.203	100	0.456