Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE1441   Type   Regulator
Locus tag   WHP77_RS04410 Genome accession   NZ_CP148153
Coordinates   842256..842909 (-) Length   217 a.a.
NCBI ID   WP_019109051.1    Uniprot ID   -
Organism   Campylobacter jejuni strain Z1323PCJ0002     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 837256..847909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP77_RS04365 (WHP77_04365) - 837642..838091 (+) 450 WP_070313924.1 hypothetical protein -
  WHP77_RS04370 (WHP77_04370) - 838104..838739 (+) 636 WP_070310085.1 DUF4376 domain-containing protein -
  WHP77_RS04375 (WHP77_04375) - 838736..839200 (+) 465 WP_002801917.1 hypothetical protein -
  WHP77_RS04380 (WHP77_04380) - 839190..839561 (+) 372 WP_002801918.1 DUF1353 domain-containing protein -
  WHP77_RS04385 (WHP77_04385) - 839558..840841 (+) 1284 WP_002801920.1 hypothetical protein -
  WHP77_RS04390 (WHP77_04390) - 840890..841348 (+) 459 WP_002858146.1 DUF5675 family protein -
  WHP77_RS04395 (WHP77_04395) - 841410..841829 (+) 420 WP_002857883.1 hypothetical protein -
  WHP77_RS04400 (WHP77_04400) - 841747..841944 (+) 198 WP_002870262.1 hypothetical protein -
  WHP77_RS04405 (WHP77_04405) - 841958..842239 (-) 282 WP_002870263.1 PLDc N-terminal domain-containing protein -
  WHP77_RS04410 (WHP77_04410) CJE1441 842256..842909 (-) 654 WP_019109051.1 DNA/RNA non-specific endonuclease Regulator
  WHP77_RS04415 (WHP77_04415) - 842915..843736 (-) 822 WP_052774273.1 hypothetical protein -
  WHP77_RS04420 (WHP77_04420) - 843726..843965 (-) 240 WP_019108957.1 hypothetical protein -
  WHP77_RS04425 (WHP77_04425) - 844162..844824 (-) 663 WP_019108958.1 S24/S26 family peptidase -
  WHP77_RS04430 (WHP77_04430) - 845059..845712 (-) 654 WP_019108959.1 hypothetical protein -
  WHP77_RS04435 (WHP77_04435) - 845916..846119 (+) 204 WP_002858450.1 hypothetical protein -
  WHP77_RS04440 (WHP77_04440) - 846116..846400 (+) 285 WP_002788580.1 hypothetical protein -
  WHP77_RS04445 (WHP77_04445) - 846831..847562 (+) 732 WP_002801548.1 phage regulatory protein/antirepressor Ant -
  WHP77_RS04450 (WHP77_04450) - 847615..847902 (+) 288 WP_002787279.1 YopX family protein -

Sequence


Protein


Download         Length: 217 a.a.        Molecular weight: 25719.25 Da        Isoelectric Point: 9.7797

>NTDB_id=866307 WHP77_RS04410 WP_019109051.1 842256..842909(-) (CJE1441) [Campylobacter jejuni strain Z1323PCJ0002]
MKKLTILFLLATLAFADYTQYKPSEEFAKYFTKQNCSQVLDKFYYLNCYDYDYKGTKAVAYRLEAENLRGKQIKKRPRFE
DDTNIPKKYRTTWSDYKHSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRIWNKIEKRERQLALKLGSLEVL
NLINYDNNPQRIKNNIAVPSSYVKILKGDNFKECYQVPNHEVDDESIRIYKVQCDNF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=866307 WHP77_RS04410 WP_019109051.1 842256..842909(-) (CJE1441) [Campylobacter jejuni strain Z1323PCJ0002]
ATGAAAAAACTTACAATCTTATTCTTACTAGCAACTCTAGCTTTTGCTGATTATACACAATATAAACCAAGCGAAGAGTT
TGCTAAGTATTTTACTAAACAAAATTGCTCACAAGTTTTAGACAAATTCTATTATCTAAATTGTTACGATTATGATTATA
AAGGGACAAAAGCAGTAGCTTATAGATTAGAAGCAGAAAATCTAAGAGGCAAACAAATTAAAAAGCGTCCTCGTTTTGAA
GATGATACCAATATTCCTAAAAAATACCGCACCACTTGGAGCGATTATAAGCATAGCGGTTATGATAGAGGGCATACTCT
TTCTAATGCCTCTATGAGAAAAACCACTCAAGCACAAAGAAGCACTTTTTTAATGAGCAATATCACTCCACAAAATCCAC
AAATTAACCAAAGGATTTGGAATAAGATTGAAAAACGCGAAAGACAACTAGCTTTAAAACTCGGAAGTTTAGAAGTTTTA
AATTTAATCAATTATGATAATAATCCACAAAGAATAAAAAACAATATAGCTGTGCCAAGCTCTTATGTTAAGATCTTAAA
AGGTGATAATTTTAAAGAATGTTATCAAGTGCCAAATCATGAAGTCGATGATGAGAGTATAAGAATATATAAGGTACAAT
GTGACAATTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

89.862

100

0.899

  CJE0566 Campylobacter jejuni RM1221

87.442

99.078

0.866