Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   Q7572_RS17735 Genome accession   NZ_CP131878
Coordinates   3637991..3638317 (-) Length   108 a.a.
NCBI ID   WP_002053185.1    Uniprot ID   A0A0A7XV72
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3632991..3643317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS17715 (Q7572_17750) - 3633089..3633718 (-) 630 WP_004710890.1 FHA domain-containing protein -
  Q7572_RS17720 (Q7572_17755) gspD 3633759..3636035 (-) 2277 WP_002053167.1 type II secretion system secretin GspD -
  Q7572_RS17725 (Q7572_17760) - 3636077..3636916 (-) 840 WP_004710893.1 type II secretion system protein N -
  Q7572_RS17730 (Q7572_17765) gspN 3636916..3637659 (-) 744 WP_004710896.1 type II secretion system protein N -
  Q7572_RS17735 (Q7572_17770) hns 3637991..3638317 (-) 327 WP_002053185.1 H-NS histone family protein Regulator
  Q7572_RS17740 (Q7572_17775) - 3638512..3638952 (-) 441 WP_004710900.1 thioesterase family protein -
  Q7572_RS17745 (Q7572_17780) - 3638960..3640153 (-) 1194 WP_004883602.1 hypothetical protein -
  Q7572_RS17750 (Q7572_17785) - 3640163..3641002 (-) 840 WP_004883603.1 hypothetical protein -
  Q7572_RS17755 (Q7572_17790) - 3641011..3641778 (-) 768 WP_004883604.1 uroporphyrinogen-III synthase -
  Q7572_RS17760 (Q7572_17795) hemC 3641783..3642700 (-) 918 WP_193786245.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12478.12 Da        Isoelectric Point: 5.0524

>NTDB_id=865735 Q7572_RS17735 WP_002053185.1 3637991..3638317(-) (hns) [Acinetobacter nosocomialis strain 2014S01-097]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNSE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=865735 Q7572_RS17735 WP_002053185.1 3637991..3638317(-) (hns) [Acinetobacter nosocomialis strain 2014S01-097]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATTGAAGATGCATATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAGCCACGCTACCGTAACAAAAACAACTCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGCTGGTTAGTTGCTGAAATCGAAAAGGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A7XV72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

99.074

100

0.991