Detailed information NTG0865734

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: Q7572_RS17445
• Genome accession: NZ_CP131878
• Coordinates: 3578221..3579081 (+)
• Length: 286 a.a.
• NCBI ID: WP_004883549.1
• Uniprot ID: A0AAV3ISU2
• Organism: Acinetobacter nosocomialis strain 2014S01-097
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3573221..3584081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7572_RS17425 (Q7572_17460)	secG	3573828..3574157 (-)	330	WP_002156913.1	preprotein translocase subunit SecG	-
Q7572_RS17430 (Q7572_17465)	tpiA	3574170..3574964 (-)	795	WP_004883547.1	triose-phosphate isomerase	-
Q7572_RS17435 (Q7572_17470)	pilB	3575255..3576967 (+)	1713	WP_004710829.1	type IV-A pilus assembly ATPase PilB	Machinery gene
Q7572_RS17440 (Q7572_17475)	pilC	3576995..3578221 (+)	1227	WP_004710832.1	type II secretion system F family protein	Machinery gene
Q7572_RS17445 (Q7572_17480)	pilD	3578221..3579081 (+)	861	WP_004883549.1	A24 family peptidase	Machinery gene
Q7572_RS17450 (Q7572_17485)	coaE	3579083..3579679 (+)	597	WP_004883551.1	dephospho-CoA kinase	-
Q7572_RS17455 (Q7572_17490)	-	3579676..3580590 (-)	915	WP_004883553.1	DMT family transporter	-
Q7572_RS17460 (Q7572_17495)	rlmB	3580626..3581375 (-)	750	WP_004883555.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
Q7572_RS17465 (Q7572_17500)	-	3581477..3581803 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
Q7572_RS17470 (Q7572_17505)	-	3581880..3583190 (-)	1311	WP_004883556.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32087.53 Da
• Isoelectric Point: 7.1784

>NTDB_id=865734 Q7572_RS17445 WP_004883549.1 3578221..3579081(+) (pilD) [Acinetobacter nosocomialis strain 2014S01-097]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACHQP
IRWYQNIPLISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVLGPTIQMLFGLILTWVLIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=865734 Q7572_RS17445 WP_004883549.1 3578221..3579081(+) (pilD) [Acinetobacter nosocomialis strain 2014S01-097]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTGATTTACCGCACACCAAGAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCCATTATTGATCATGAGAAGCTAACTTTAAGTAAGCCTGCTTCATCATGCCCTGCATGCCATCAACCC
ATCCGTTGGTATCAAAATATCCCACTCATAAGCTGGCTAGTGTTAAGAGGAAAATGTGGTCATTGCCAGCACCCGATTAG
CATTCGCTATCCAGCCATCGAACTACTTACCATGCTATGTTCATTGGTGGTGGTTATGGTGCTTGGTCCAACTATACAAA
TGCTTTTTGGACTGATCCTCACATGGGTACTGATAGCACTTACCTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACTCTACCTTTAGCTGCGCTTGGTTTAGGCATTAACACCTTTAATATCTACACCTCACCCAACTCGGCCATTTGGGG
TTACCTCATTGGTTTTCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTAATTACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCAGCATTAGGTGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGCATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCGTTTGGGCCATATATTGCCAT
TGCAGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-126)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	99.301	100	0.993
pilD	Acinetobacter baumannii D1279779	97.552	100	0.976
pilD	Vibrio cholerae strain A1552	53.309	95.105	0.507
pilD	Vibrio campbellii strain DS40M4	51.661	94.755	0.49
pilD	Neisseria gonorrhoeae MS11	48.106	92.308	0.444