Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   Q7573_RS01825 Genome accession   NZ_CP131873
Coordinates   390272..390799 (+) Length   175 a.a.
NCBI ID   WP_002116864.1    Uniprot ID   A0AAN4MGG3
Organism   Acinetobacter pittii strain 2014S07-126     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 385272..395799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7573_RS01810 (Q7573_01815) pilM 387813..388871 (+) 1059 WP_031945632.1 pilus assembly protein PilM Machinery gene
  Q7573_RS01815 (Q7573_01820) pilN 388871..389512 (+) 642 WP_002116944.1 PilN domain-containing protein Machinery gene
  Q7573_RS01820 (Q7573_01825) pilO 389509..390261 (+) 753 WP_002116684.1 type 4a pilus biogenesis protein PilO Machinery gene
  Q7573_RS01825 (Q7573_01830) pilP 390272..390799 (+) 528 WP_002116864.1 pilus assembly protein PilP Machinery gene
  Q7573_RS01830 (Q7573_01835) pilQ 390862..393027 (+) 2166 WP_002116833.1 type IV pilus secretin PilQ Machinery gene
  Q7573_RS01835 (Q7573_01840) aroK 393039..393608 (+) 570 WP_002116987.1 shikimate kinase AroK -
  Q7573_RS01840 (Q7573_01845) aroB 393637..394719 (+) 1083 WP_342258327.1 3-dehydroquinate synthase -
  Q7573_RS01845 (Q7573_01850) - 394736..395605 (+) 870 WP_002117066.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19265.32 Da        Isoelectric Point: 9.0270

>NTDB_id=865659 Q7573_RS01825 WP_002116864.1 390272..390799(+) (pilP) [Acinetobacter pittii strain 2014S07-126]
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=865659 Q7573_RS01825 WP_002116864.1 390272..390799(+) (pilP) [Acinetobacter pittii strain 2014S07-126]
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTACAGGTAGGGAATTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTTCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

88.571

100

0.886
  comL Acinetobacter baylyi ADP1

75.152

94.286

0.709