Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   Q7609_RS00275 Genome accession   NZ_CP131725
Coordinates   57112..57624 (-) Length   170 a.a.
NCBI ID   WP_005651545.1    Uniprot ID   A0A0H3PJN2
Organism   Haemophilus influenzae strain 2018S05-172     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 52112..62624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7609_RS00260 (Q7609_00260) comQ 55418..55705 (-) 288 WP_005648029.1 DUF5374 domain-containing protein Machinery gene
  Q7609_RS00265 (Q7609_00265) comP 55698..56381 (-) 684 WP_005651547.1 DUF2572 family protein Machinery gene
  Q7609_RS00270 (Q7609_00270) comO 56396..57112 (-) 717 WP_005651546.1 type II secretion system protein J Machinery gene
  Q7609_RS00275 (Q7609_00275) comN 57112..57624 (-) 513 WP_005651545.1 type II secretion system protein Machinery gene
  Q7609_RS00280 (Q7609_00280) suhB 57824..58627 (+) 804 WP_005651543.1 inositol-1-monophosphatase -
  Q7609_RS00285 (Q7609_00285) nrfE 58737..60644 (+) 1908 WP_005651541.1 heme lyase NrfEFG subunit NrfE -
  Q7609_RS00290 (Q7609_00290) - 60641..61171 (+) 531 WP_032822961.1 DsbE family thiol:disulfide interchange protein -
  Q7609_RS00295 (Q7609_00295) nrfF 61168..62325 (+) 1158 WP_005651538.1 heme lyase NrfEFG subunit NrfF -

Sequence

Protein


Download         Length: 170 a.a.        Molecular weight: 19877.15 Da        Isoelectric Point: 8.9743

>NTDB_id=864852 Q7609_RS00275 WP_005651545.1 57112..57624(-) (comN) [Haemophilus influenzae strain 2018S05-172]
MQKGMTLVELLIGLAIISIVLNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN

Nucleotide


Download         Length: 513 bp        

>NTDB_id=864852 Q7609_RS00275 WP_005651545.1 57112..57624(-) (comN) [Haemophilus influenzae strain 2018S05-172]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGTGCTGAATTTTGCCGTGCCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-21)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3PJN2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

98.824

100

0.988