Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WHO62_RS21740 Genome accession   NZ_CP148114
Coordinates   4147884..4148678 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis isolate FELIX_MS506     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4142884..4153678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO62_RS21715 rocD 4143334..4144539 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  WHO62_RS21720 rocR 4144780..4146165 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  WHO62_RS21725 - 4146147..4146335 (-) 189 Protein_4227 ATP-binding protein -
  WHO62_RS21730 - 4146452..4146580 (-) 129 WP_003242634.1 hypothetical protein -
  WHO62_RS21735 htrA 4146600..4147802 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  WHO62_RS21740 vicX 4147884..4148678 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  WHO62_RS21745 walI 4148700..4149542 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  WHO62_RS21750 walH 4149529..4150896 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  WHO62_RS21755 walK 4150886..4152721 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  WHO62_RS21760 walR 4152729..4153436 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=864852 WHO62_RS21740 WP_003242676.1 4147884..4148678(-) (vicX) [Bacillus subtilis isolate FELIX_MS506]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=864852 WHO62_RS21740 WP_003242676.1 4147884..4148678(-) (vicX) [Bacillus subtilis isolate FELIX_MS506]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53