Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   Q7612_RS00290 Genome accession   NZ_CP131722
Coordinates   58391..58903 (-) Length   170 a.a.
NCBI ID   WP_005648034.1    Uniprot ID   A0A2X1QPL8
Organism   Haemophilus influenzae strain 2018C09-260     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 53391..63903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7612_RS00275 (Q7612_00275) comQ 56697..56984 (-) 288 WP_005655928.1 DUF5374 domain-containing protein Machinery gene
  Q7612_RS00280 (Q7612_00280) comP 56977..57660 (-) 684 WP_005648030.1 DUF2572 family protein Machinery gene
  Q7612_RS00285 (Q7612_00285) comO 57675..58391 (-) 717 WP_005648032.1 type II secretion system protein J Machinery gene
  Q7612_RS00290 (Q7612_00290) comN 58391..58903 (-) 513 WP_005648034.1 type II secretion system protein Machinery gene
  Q7612_RS00295 (Q7612_00295) suhB 59103..59906 (+) 804 WP_032824502.1 inositol-1-monophosphatase -
  Q7612_RS00300 (Q7612_00300) nrfE 60015..61922 (+) 1908 WP_005666026.1 heme lyase NrfEFG subunit NrfE -
  Q7612_RS00305 (Q7612_00305) - 61922..62452 (+) 531 WP_005666027.1 DsbE family thiol:disulfide interchange protein -
  Q7612_RS00310 (Q7612_00310) nrfF 62449..63606 (+) 1158 WP_005666028.1 heme lyase NrfEFG subunit NrfF -

Sequence

Protein


Download         Length: 170 a.a.        Molecular weight: 19850.04 Da        Isoelectric Point: 8.4863

>NTDB_id=864740 Q7612_RS00290 WP_005648034.1 58391..58903(-) (comN) [Haemophilus influenzae strain 2018C09-260]
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPEEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN

Nucleotide


Download         Length: 513 bp        

>NTDB_id=864740 Q7612_RS00290 WP_005648034.1 58391..58903(-) (comN) [Haemophilus influenzae strain 2018C09-260]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAAGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGGAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-21)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X1QPL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

98.824

100

0.988