Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   WHL49_RS09590 Genome accession   NZ_CP148103
Coordinates   1897531..1898148 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS361     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1892531..1903148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL49_RS09560 yndJ 1892845..1894485 (+) 1641 WP_003231612.1 YndJ family protein -
  WHL49_RS09565 - 1894573..1894887 (+) 315 WP_003245621.1 hypothetical protein -
  WHL49_RS09570 pghL 1895113..1895871 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  WHL49_RS09575 - 1895898..1896347 (-) 450 WP_003245454.1 YndM family protein -
  WHL49_RS09580 fosM 1896555..1896989 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  WHL49_RS09585 - 1896898..1897194 (+) 297 WP_223257629.1 hypothetical protein -
  WHL49_RS09590 dinR/lexA 1897531..1898148 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  WHL49_RS09595 yneA 1898298..1898615 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  WHL49_RS09600 dinL 1898634..1899287 (+) 654 WP_003231596.1 recombinase family protein -
  WHL49_RS09605 ynzC 1899351..1899584 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  WHL49_RS09610 recP/tkt 1899753..1901756 (+) 2004 WP_003245397.1 transketolase Machinery gene
  WHL49_RS09615 sirA 1901909..1902355 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  WHL49_RS09620 yneF 1902441..1902659 (+) 219 WP_003221221.1 YneF family protein -
  WHL49_RS09625 ynzD 1902733..1902906 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=864061 WHL49_RS09590 WP_003238209.1 1897531..1898148(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=864061 WHL49_RS09590 WP_003238209.1 1897531..1898148(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1