Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   Q7625_RS11090 Genome accession   NZ_CP131708
Coordinates   2174823..2175581 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain 2016C10-332     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2169823..2180581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7625_RS11060 (Q7625_11035) comE 2170420..2171172 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  Q7625_RS11065 (Q7625_11040) comD/comD2 2171169..2172494 (-) 1326 WP_000364843.1 competence system sensor histidine kinase ComD Regulator
  Q7625_RS11070 (Q7625_11045) comC/comC2 2172515..2172640 (-) 126 WP_000799694.1 competence-stimulating peptide ComC Regulator
  Q7625_RS11080 (Q7625_11055) rlmH 2172922..2173401 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  Q7625_RS11085 (Q7625_11060) htrA 2173584..2174765 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  Q7625_RS11090 (Q7625_11065) spo0J 2174823..2175581 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=864010 Q7625_RS11090 WP_000410378.1 2174823..2175581(+) (spo0J) [Streptococcus pneumoniae strain 2016C10-332]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=864010 Q7625_RS11090 WP_000410378.1 2174823..2175581(+) (spo0J) [Streptococcus pneumoniae strain 2016C10-332]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
GCTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508