Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q7635_RS08095 Genome accession   NZ_CP131670
Coordinates   1661233..1661919 (-) Length   228 a.a.
NCBI ID   WP_001788928.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 2004N07-109     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1656233..1666919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7635_RS08075 (Q7635_08070) rpsT 1657147..1657398 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q7635_RS08080 (Q7635_08075) holA 1657443..1658417 (-) 975 WP_001282567.1 DNA polymerase III subunit delta -
  Q7635_RS08085 (Q7635_08080) comEC 1658474..1660675 (-) 2202 WP_001837660.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q7635_RS08090 (Q7635_08085) - 1660680..1661141 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q7635_RS08095 (Q7635_08090) comEA 1661233..1661919 (-) 687 WP_001788928.1 ComEA family DNA-binding protein Machinery gene
  Q7635_RS08100 (Q7635_08095) - 1661959..1662675 (-) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  Q7635_RS08105 (Q7635_08100) rsfS 1662678..1663031 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q7635_RS08110 (Q7635_08105) yqeK 1663032..1663616 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q7635_RS08115 (Q7635_08110) nadD 1663606..1664175 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q7635_RS08120 (Q7635_08115) yhbY 1664178..1664468 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  Q7635_RS08125 (Q7635_08120) aroE 1664472..1665278 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  Q7635_RS08130 (Q7635_08125) yqeH 1665292..1666392 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25888.59 Da        Isoelectric Point: 9.6751

>NTDB_id=863620 Q7635_RS08095 WP_001788928.1 1661233..1661919(-) (comEA) [Staphylococcus aureus strain 2004N07-109]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=863620 Q7635_RS08095 WP_001788928.1 1661233..1661919(-) (comEA) [Staphylococcus aureus strain 2004N07-109]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

99.561

0.996
  comEA Staphylococcus aureus MW2

97.357

99.561

0.969