Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WFE12_RS21760 Genome accession   NZ_CP147877
Coordinates   4150262..4151056 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4145262..4156056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFE12_RS21735 rocD 4145712..4146917 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  WFE12_RS21740 rocR 4147158..4148543 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  WFE12_RS21745 - 4148525..4148713 (-) 189 Protein_4231 ATP-binding protein -
  WFE12_RS21750 - 4148830..4148958 (-) 129 WP_003242634.1 hypothetical protein -
  WFE12_RS21755 htrA 4148978..4150180 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  WFE12_RS21760 vicX 4150262..4151056 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  WFE12_RS21765 walI 4151078..4151920 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  WFE12_RS21770 walH 4151907..4153274 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  WFE12_RS21775 walK 4153264..4155099 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  WFE12_RS21780 walR 4155107..4155814 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=863367 WFE12_RS21760 WP_003242676.1 4150262..4151056(-) (vicX) [Bacillus subtilis subsp. subtilis str. 168]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=863367 WFE12_RS21760 WP_003242676.1 4150262..4151056(-) (vicX) [Bacillus subtilis subsp. subtilis str. 168]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53