Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   Q7641_RS08565 Genome accession   NZ_CP131655
Coordinates   1733662..1734348 (-) Length   228 a.a.
NCBI ID   WP_072361794.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 2010N06-097     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1728662..1739348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7641_RS08545 (Q7641_08550) rpsT 1729576..1729827 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  Q7641_RS08550 (Q7641_08555) holA 1729872..1730846 (-) 975 WP_031587652.1 DNA polymerase III subunit delta -
  Q7641_RS08555 (Q7641_08560) comEC 1730903..1733104 (-) 2202 WP_025174327.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q7641_RS08560 (Q7641_08565) - 1733109..1733570 (-) 462 WP_000439693.1 ComE operon protein 2 -
  Q7641_RS08565 (Q7641_08570) comEA 1733662..1734348 (-) 687 WP_072361794.1 ComEA family DNA-binding protein Machinery gene
  Q7641_RS08570 (Q7641_08575) - 1734388..1735104 (-) 717 WP_000084822.1 class I SAM-dependent methyltransferase -
  Q7641_RS08575 (Q7641_08580) rsfS 1735107..1735460 (-) 354 WP_001088020.1 ribosome silencing factor -
  Q7641_RS08580 (Q7641_08585) yqeK 1735461..1736045 (-) 585 WP_001019326.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  Q7641_RS08585 (Q7641_08590) nadD 1736035..1736604 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  Q7641_RS08590 (Q7641_08595) yhbY 1736607..1736897 (-) 291 WP_000627815.1 ribosome assembly RNA-binding protein YhbY -
  Q7641_RS08595 (Q7641_08600) aroE 1736901..1737707 (-) 807 WP_000666761.1 shikimate dehydrogenase -
  Q7641_RS08600 (Q7641_08605) - 1737721..1737954 (-) 234 Protein_1691 ribosome biogenesis GTPase YqeH -
  Q7641_RS08605 (Q7641_08610) yqeH 1737984..1739084 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=863354 Q7641_RS08565 WP_072361794.1 1733662..1734348(-) (comEA) [Staphylococcus aureus strain 2010N06-097]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=863354 Q7641_RS08565 WP_072361794.1 1733662..1734348(-) (comEA) [Staphylococcus aureus strain 2010N06-097]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

97.797

99.561

0.974